RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 USP17L17D6RBQ6 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L19D6RCP7 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L20D6RJB6 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 ZBTB5O15062 677 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 HOXA7P31268 230 aaPredicted RBP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 KIF23Q02241 960 aaPredicted RBP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 USP17L24Q0WX57 530 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 SREBF2Q12772 1141 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 PABPC4Q13310 644 aaKnown RBP eCLIP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 KRT40Q6A162 431 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 GPAT2Q6NUI2 795 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 TYW1BQ6NUM6 668 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 CATSPERGQ6ZRH7 1159 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 REM2Q8IYK8 340 aaPredicted RBP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 COA7Q96BR5 231 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 ATG4CQ96DT6 458 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 RBM27Q9P2N5 1060 aaKnown RBP19.87■□□□□ 0.77
PTPRU-206ENST00000465525 MTMR6Q9Y217 621 aa19.87■□□□□ 0.77
PTPRU-206ENST00000465525 PLA2G6O60733 806 aa19.86■□□□□ 0.77
PTPRU-206ENST00000465525 VEGFBP49765 207 aa19.86■□□□□ 0.77
PTPRU-206ENST00000465525 ANKRD23Q86SG2 305 aa19.86■□□□□ 0.77
PTPRU-206ENST00000465525 PRPF38AQ8NAV1 312 aaKnown RBP19.86■□□□□ 0.77
PTPRU-206ENST00000465525 PPP1R9AQ9ULJ8 1098 aa19.86■□□□□ 0.77
PTPRU-206ENST00000465525 STXBP3O00186 592 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 MAP2K2P36507 400 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 TM4SF4P48230 202 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 TRIM29Q14134 588 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 USH1GQ495M9 461 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 FERMT3Q86UX7 667 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 PTPN18Q99952 460 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 CIZ1Q9ULV3 898 aaPredicted RBP19.85■□□□□ 0.77
PTPRU-206ENST00000465525 SLC45A1Q9Y2W3 748 aa19.85■□□□□ 0.77
PTPRU-206ENST00000465525 BTBD19C9JJ37 291 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 AOC2O75106 756 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 MCTP1Q6DN14 999 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 FBXO18Q8NFZ0 1043 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 ZIC5Q96T25 663 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 RANBP17Q9H2T7 1088 aaKnown RBP19.84■□□□□ 0.77
PTPRU-206ENST00000465525 ADAMTS3O15072 1205 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 OSBPP22059 807 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 DSG3P32926 999 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 NAPAP54920 295 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 COG2Q14746 738 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 ZCCHC17Q9NP64 241 aaKnown RBP19.84■□□□□ 0.77
PTPRU-206ENST00000465525 BARHL2Q9NY43 387 aa19.84■□□□□ 0.77
PTPRU-206ENST00000465525 PDHXO00330 501 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 PEX10O60683 326 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 BRD1O95696 1058 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 ZSCAN22P10073 491 aaPredicted RBP19.83■□□□□ 0.76
PTPRU-206ENST00000465525 IRX3P78415 501 aaPredicted RBP19.83■□□□□ 0.76
PTPRU-206ENST00000465525 FBXO11Q86XK2 927 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 CPXCR1Q8N123 301 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 FAM43AQ8N2R8 423 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 ASCC2Q9H1I8 757 aaPredicted RBP19.83■□□□□ 0.76
PTPRU-206ENST00000465525 HOXC10Q9NYD6 342 aa19.83■□□□□ 0.76
PTPRU-206ENST00000465525 SPDYE16A6NNV3 312 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 VWA5AO00534 786 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 NLRP5P59047 1200 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 NUCB2P80303 420 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 FOXD4L6Q3SYB3 417 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 FOXD4L3Q6VB84 417 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 IFNL1Q8IU54 200 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 AGBL1Q96MI9 1066 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 P2RX7Q99572 595 aaKnown RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 RAVER2Q9HCJ3 691 aaKnown RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 PNMA3Q9UL41 463 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 CTDP1Q9Y5B0 961 aaPredicted RBP19.82■□□□□ 0.76
PTPRU-206ENST00000465525 PCDHA1Q9Y5I3 950 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 A0A0G2JMZ2 1700 aa19.82■□□□□ 0.76
PTPRU-206ENST00000465525 IGF2BP3O00425 579 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTPRU-206ENST00000465525 MMP1P03956 469 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 XBP1P17861 261 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 OXER1Q8TDS5 423 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 CHAMP1Q96JM3 812 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 PHF20Q9BVI0 1012 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 AMNQ9BXJ7 453 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 SLC38A10Q9HBR0 1119 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 MYPNQ86TC9 1320 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 MYH15Q9Y2K3 1946 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 KIF28PB7ZC32 967 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 ZBED4O75132 1171 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 POTEEQ6S8J3 1075 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 ZNF536O15090 1300 aa19.81■□□□□ 0.76
PTPRU-206ENST00000465525 F13A1P00488 732 aa19.8■□□□□ 0.76
PTPRU-206ENST00000465525 CYP2C8P10632 490 aa19.8■□□□□ 0.76
PTPRU-206ENST00000465525 NPY5RQ15761 445 aa19.8■□□□□ 0.76
PTPRU-206ENST00000465525 SH3GLB2Q9NR46 395 aa19.8■□□□□ 0.76
PTPRU-206ENST00000465525 CCPG1Q9ULG6 757 aa19.8■□□□□ 0.76
PTPRU-206ENST00000465525 SMCO2A6NFE2 343 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 BTBD18B2RXH4 712 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 ALDH1A1P00352 501 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 FDX1P10109 184 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 NR5A1Q13285 461 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 FAM173BQ6P4H8 233 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 DIS3L2Q8IYB7 885 aaKnown RBP19.79■□□□□ 0.76
PTPRU-206ENST00000465525 REPS2Q8NFH8 660 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 CCDC148Q8NFR7 591 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 ADAMTS5Q9UNA0 930 aa19.79■□□□□ 0.76
PTPRU-206ENST00000465525 ICAM1P05362 532 aa19.78■□□□□ 0.76
PTPRU-206ENST00000465525 HERVK_113P62684 666 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms