RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 SNAP25P60880 206 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 IRX3P78415 501 aaPredicted RBP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 PKN1Q16512 942 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 HOMER1Q86YM7 354 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 TRIM22Q8IYM9 498 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 ATG4CQ96DT6 458 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 RRP36Q96EU6 259 aaKnown RBP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 ORC3Q9UBD5 711 aaPredicted RBP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 ADAMTS5Q9UNA0 930 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 MYPNQ86TC9 1320 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 SPDYE16A6NNV3 312 aaPredicted RBP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 IGF2BP3O00425 579 aaKnown RBP eCLIP19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 PDCP20941 246 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 OSBPP22059 807 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 TM4SF4P48230 202 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 POTEEQ6S8J3 1075 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 ATP6V1DQ9Y5K8 247 aa19.54■□□□□ 0.72
EXOSC3-203ENST00000465229 PCNTO95613 3336 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 STK36Q9NRP7 1315 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 VWA5AO00534 786 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 ZBTB5O15062 677 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 HSPA6P17066 643 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 VEGFBP49765 207 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 HMGN5P82970 282 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 AKAP17AQ02040 695 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 SREBF2Q12772 1141 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 L1TD1Q5T7N2 865 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 IFNL1Q8IU54 200 aa19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 RANBP17Q9H2T7 1088 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 DDX49Q9Y6V7 483 aaKnown RBP19.53■□□□□ 0.72
EXOSC3-203ENST00000465229 PNMA6FA0A0J9YX94 578 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 FSD2A1L4K1 749 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 DEXIO95424 95 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 CYP2C8P10632 490 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 HERVK_113P62684 666 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 CDC37Q16543 378 aaPredicted RBP19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 QRICH1Q2TAL8 776 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 SLC38A10Q9HBR0 1119 aa19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 RBM27Q9P2N5 1060 aaKnown RBP19.52■□□□□ 0.72
EXOSC3-203ENST00000465229 PPP1R11O60927 126 aaPredicted RBP19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 FDX1P10109 184 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 PFKFB3Q16875 520 aaPredicted RBP19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 LBX2Q6XYB7 198 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 AIFM3Q96NN9 605 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 SEC63Q9UGP8 760 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 PNMA3Q9UL41 463 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 RLFQ13129 1914 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 ZBED4O75132 1171 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 REPS2Q8NFH8 660 aa19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 ZCCHC17Q9NP64 241 aaKnown RBP19.51■□□□□ 0.71
EXOSC3-203ENST00000465229 CEP350Q5VT06 3117 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 ZNF536O15090 1300 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 SCG2P13521 617 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 CCDC174Q6PII3 467 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 FAM184AQ8NB25 1140 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 TMEM87AQ8NBN3 555 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 ALG1Q9BT22 464 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 GZF1Q9H116 711 aaPredicted RBP19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 MTMR6Q9Y217 621 aa19.5■□□□□ 0.71
EXOSC3-203ENST00000465229 PRPF40AO75400 957 aaKnown RBP19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 MBD3O95983 291 aa19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 F13A1P00488 732 aa19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 MAP2K2P36507 400 aa19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 OTUD7BQ6GQQ9 843 aa19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 RAVER2Q9HCJ3 691 aaKnown RBP19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 RBPJLQ9UBG7 517 aa19.49■□□□□ 0.71
EXOSC3-203ENST00000465229 GOLGA6L3A6NEY3 463 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 PEX10O60683 326 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 TMEM132BQ14DG7 1078 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 FOXD4L5Q5VV16 416 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 WWC2Q6AWC2 1192 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 HEATR3Q7Z4Q2 680 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 FBXO11Q86XK2 927 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 REM2Q8IYK8 340 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 CPXCR1Q8N123 301 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 MB21D1Q8N884 522 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 FOXD4L4Q8WXT5 416 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 WASF1Q92558 559 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 GPKOWQ92917 476 aaPredicted RBP eCLIP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 AGBL1Q96MI9 1066 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 PARK7Q99497 189 aaKnown RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 BTBD7Q9P203 1132 aa19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 ZNF214Q9UL59 606 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 CTDP1Q9Y5B0 961 aaPredicted RBP19.48■□□□□ 0.71
EXOSC3-203ENST00000465229 ICAM1P05362 532 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 SMCR8Q8TEV9 937 aaPredicted RBP19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 COA7Q96BR5 231 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 SHISA4Q96DD7 197 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 AMNQ9BXJ7 453 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 TXNRD2Q9NNW7 524 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 GJB4Q9NTQ9 266 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 BARHL2Q9NY43 387 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 KIF3AQ9Y496 699 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 STXBP3O00186 592 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 ATP2A1O14983 1001 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 CNMDO75829 334 aa19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 TAL1P17542 331 aaPredicted RBP19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 TAF1CQ15572 869 aaPredicted RBP19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 LARP1BQ659C4 914 aaKnown RBP19.47■□□□□ 0.71
EXOSC3-203ENST00000465229 TYW1BQ6NUM6 668 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms