RNA–Protein interactions for RNA: ENST00000465125.1

RERE-208, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

TSL 5

Gene RERE, Length 396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-208ENST00000465125 HOMER1Q86YM7 354 aa28.36■■■□□ 2.13
RERE-208ENST00000465125 NECAB1Q8N987 351 aa28.36■■■□□ 2.13
RERE-208ENST00000465125 RRP36Q96EU6 259 aaKnown RBP28.36■■■□□ 2.13
RERE-208ENST00000465125 CNTNAP5Q8WYK1 1306 aa28.36■■■□□ 2.13
RERE-208ENST00000465125 CPXCR1Q8N123 301 aa28.35■■■□□ 2.13
RERE-208ENST00000465125 PIBF1Q8WXW3 757 aa28.35■■■□□ 2.13
RERE-208ENST00000465125 MTMR8Q96EF0 704 aa28.35■■■□□ 2.13
RERE-208ENST00000465125 PIGSQ96S52 555 aa28.35■■■□□ 2.13
RERE-208ENST00000465125 RAVER2Q9HCJ3 691 aaKnown RBP28.35■■■□□ 2.13
RERE-208ENST00000465125 ZNF214Q9UL59 606 aaPredicted RBP28.35■■■□□ 2.13
RERE-208ENST00000465125 CCNA1P78396 465 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 FUT2Q10981 343 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 QRICH1Q2TAL8 776 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 TEX13BQ9BXU2 312 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 SPATC1LQ9H0A9 340 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 SEC63Q9UGP8 760 aaKnown RBP28.34■■■□□ 2.13
RERE-208ENST00000465125 TSKSQ9UJT2 592 aa28.34■■■□□ 2.13
RERE-208ENST00000465125 ATP2A1O14983 1001 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 ZBTB5O15062 677 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 CDKL5O76039 1030 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 IFNAR1P17181 557 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 STAT3P40763 770 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 SNRNP48Q6IEG0 339 aaKnown RBP28.33■■■□□ 2.13
RERE-208ENST00000465125 PNMA2Q9UL42 364 aa28.33■■■□□ 2.13
RERE-208ENST00000465125 ICAM1P05362 532 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 NTRK3Q16288 839 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 CCDC83Q8IWF9 413 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 TMX3Q96JJ7 454 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 CCPG1Q9ULG6 757 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 ZNF536O15090 1300 aa28.32■■■□□ 2.12
RERE-208ENST00000465125 BAZ2BQ9UIF8 2168 aaKnown RBP28.31■■■□□ 2.12
RERE-208ENST00000465125 PNMA6FA0A0J9YX94 578 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 GPR25O00155 361 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 SLC4A3P48751 1232 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 AKAP17AQ02040 695 aaKnown RBP28.31■■■□□ 2.12
RERE-208ENST00000465125 Q3C1V9 767 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 FBXO11Q86XK2 927 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 PHKBQ93100 1093 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 AGBL1Q96MI9 1066 aa28.31■■■□□ 2.12
RERE-208ENST00000465125 MOV10L1Q9BXT6 1211 aaKnown RBP28.31■■■□□ 2.12
RERE-208ENST00000465125 MYH6P13533 1939 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 HSPA1AP0DMV8 641 aaKnown RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 HSPA1BP0DMV9 641 aaKnown RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 COPB2P35606 906 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 SP3Q02447 781 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 NOM1Q5C9Z4 860 aaKnown RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 RIOX2Q8IUF8 465 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 CCAR1Q8IX12 1150 aaKnown RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 TRIM22Q8IYM9 498 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 SNX21Q969T3 373 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 SLC26A6Q9BXS9 759 aa28.3■■■□□ 2.12
RERE-208ENST00000465125 RBM27Q9P2N5 1060 aaKnown RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 V9GY48 417 aaPredicted RBP28.3■■■□□ 2.12
RERE-208ENST00000465125 PCNTO95613 3336 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 hCG_1642624A0A1W2PR95 340 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 SLC25A27O95847 323 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 SSRP1Q08945 709 aaKnown RBP28.29■■■□□ 2.12
RERE-208ENST00000465125 ST3GAL1Q11201 340 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 TRAF1Q13077 416 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 USH1GQ495M9 461 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 HSCBQ8IWL3 235 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 SHCBP1Q8NEM2 672 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 AMNQ9BXJ7 453 aa28.29■■■□□ 2.12
RERE-208ENST00000465125 RNF26Q9BY78 433 aaPredicted RBP28.29■■■□□ 2.12
RERE-208ENST00000465125 ALAS1P13196 640 aa28.28■■■□□ 2.12
RERE-208ENST00000465125 TKFCQ3LXA3 575 aa28.28■■■□□ 2.12
RERE-208ENST00000465125 NCAPG2Q86XI2 1143 aa28.28■■■□□ 2.12
RERE-208ENST00000465125 CWC22Q9HCG8 908 aaKnown RBP28.28■■■□□ 2.12
RERE-208ENST00000465125 PRPF3O43395 683 aaKnown RBP28.27■■■□□ 2.12
RERE-208ENST00000465125 PPP1R11O60927 126 aaPredicted RBP28.27■■■□□ 2.12
RERE-208ENST00000465125 FKTNO75072 461 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 PPFIA3O75145 1194 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 FMNL1O95466 1100 aaPredicted RBP28.27■■■□□ 2.12
RERE-208ENST00000465125 MAPK4P31152 587 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 KIF22Q14807 665 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 WDR78Q5VTH9 848 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 PORCNQ9H237 461 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 HOMER2Q9NSB8 354 aa28.27■■■□□ 2.12
RERE-208ENST00000465125 ABCB11O95342 1321 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 K7ELQ4 463 aaPredicted RBP28.26■■■□□ 2.11
RERE-208ENST00000465125 FOXN1O15353 648 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 CTDNEP1O95476 244 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 TAL1P17542 331 aaPredicted RBP28.26■■■□□ 2.11
RERE-208ENST00000465125 ERCC3P19447 782 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 LACTBP83111 547 aaPredicted RBP28.26■■■□□ 2.11
RERE-208ENST00000465125 MROH8Q9H579 483 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 EFCC1Q9HA90 598 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 RNF146Q9NTX7 359 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 RIPK3Q9Y572 518 aa28.26■■■□□ 2.11
RERE-208ENST00000465125 STK36Q9NRP7 1315 aa28.25■■■□□ 2.11
RERE-208ENST00000465125 PTPDC1A2A3K4 754 aa28.25■■■□□ 2.11
RERE-208ENST00000465125 HEATR3Q7Z4Q2 680 aa28.25■■■□□ 2.11
RERE-208ENST00000465125 NSUN7Q8NE18 718 aaKnown RBP28.25■■■□□ 2.11
RERE-208ENST00000465125 ZNF296Q8WUU4 475 aaPredicted RBP28.25■■■□□ 2.11
RERE-208ENST00000465125 LLPHQ9BRT6 129 aaKnown RBP28.25■■■□□ 2.11
RERE-208ENST00000465125 FBXO40Q9UH90 709 aa28.25■■■□□ 2.11
RERE-208ENST00000465125 PCDHA1Q9Y5I3 950 aa28.25■■■□□ 2.11
RERE-208ENST00000465125 ECM2O94769 699 aaPredicted RBP28.24■■■□□ 2.11
RERE-208ENST00000465125 HSPA8P11142 646 aaKnown RBP28.24■■■□□ 2.11
RERE-208ENST00000465125 PFKFB3Q16875 520 aaPredicted RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms