RNA–Protein interactions for RNA: ENST00000464576.1

PTPN18-209, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 5

Gene PTPN18, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-209	ENST00000464576	CHMP4C	Q96CF2	233 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	TOX2	Q96NM4	488 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	GUCD1	Q96NT3	240 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	CDX2	Q99626	313 aa	Predicted RBP	11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	SLC38A10	Q9HBR0	1119 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	STX8	Q9UNK0	236 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	RIPK3	Q9Y572	518 aa		11.21	□□□□□ -0.61
PTPN18-209	ENST00000464576	ELP1	O95163	1332 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	TSPY2	A6NKD2	308 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	ADAMTS4	O75173	837 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	SNAI1	O95863	264 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	CCDC144B	Q3MJ40	725 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	FAM160B2	Q86V87	743 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	NEDD1	Q8NHV4	660 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	MAFA	Q8NHW3	353 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	AP5M1	Q9H0R1	490 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	ACAD9	Q9H845	621 aa		11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	11.2	□□□□□ -0.62
PTPN18-209	ENST00000464576	DNAJC25-GNG10	A0A024R161	153 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576		A0A0U1RQG5	324 aa	Predicted RBP	11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	ASB14	A6NK59	587 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	ZEB2	O60315	1214 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	TIMP1	P01033	207 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	ASGR1	P07306	291 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	FOSL2	P15408	326 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	TNFAIP2	Q03169	654 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	PPARA	Q07869	468 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	FAAP100	Q0VG06	881 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	PPIG	Q13427	754 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	2e-7	■■□□□ 13.9
PTPN18-209	ENST00000464576	CCDC129	Q6ZRS4	1044 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	ARMCX2	Q7L311	632 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	ANKRD33	Q7Z3H0	272 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	CCDC144CP	Q8IYA2	1237 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	TMEM199	Q8N511	208 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	STAG1	Q8WVM7	1258 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	TOMM22	Q9NS69	142 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	MTMR7	Q9Y216	660 aa		11.19	□□□□□ -0.62
PTPN18-209	ENST00000464576	IGKV6D-41	A0A0C4DH26	115 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	RANBP6	O60518	1105 aa	Known RBP	11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	ALAS1	P13196	640 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	MX1	P20591	662 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	MCC	P23508	829 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	CCDC96	Q2M329	555 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	TKFC	Q3LXA3	575 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	KLHDC9	Q8NEP7	349 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	MYLIP	Q8WY64	445 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	GMCL1	Q96IK5	515 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	TRERF1	Q96PN7	1200 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	SEC62	Q99442	399 aa	Known RBP	11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	RNF146	Q9NTX7	359 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	MYO9B	Q13459	2157 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	EYS	Q5T1H1	3165 aa		11.18	□□□□□ -0.62
PTPN18-209	ENST00000464576	PRUNE2	Q8WUY3	3088 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	TMEM265	A0A087WTH1	108 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	ARVCF	O00192	962 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	ITGB8	P26012	769 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	CST5	P28325	142 aa	Predicted RBP	11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	GJA9	P57773	515 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	CNTN2	Q02246	1040 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	RCSD1	Q6JBY9	416 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	MFSD5	Q6N075	450 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	KCTD1	Q719H9	257 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	AGBL1	Q96MI9	1066 aa		11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	MTIF3	Q9H2K0	278 aa	Known RBP	11.17	□□□□□ -0.62
PTPN18-209	ENST00000464576	CABYR	O75952	493 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	DNAJB2	P25686	324 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	CTDSPL2	Q05D32	466 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	ZMYM1	Q5SVZ6	1142 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	ANKRD45	Q5TZF3	282 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	NSMF	Q6X4W1	530 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	MPHOSPH6	Q99547	160 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	COL25A1	Q9BXS0	654 aa	Predicted RBP	11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	PPP1R12C	Q9BZL4	782 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	ADD3	Q9UEY8	706 aa	Known RBP	11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	CCPG1	Q9ULG6	757 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	PLIN4	Q96Q06	1357 aa		11.16	□□□□□ -0.62
PTPN18-209	ENST00000464576	MYADML2	A6NDP7	307 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	DYNC1LI2	O43237	492 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	PLA2G6	O60733	806 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	EPHB4	P54760	987 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	BEX3	Q00994	111 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	FSCN1	Q16658	493 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	RRP12	Q5JTH9	1297 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	PSRC1	Q6PGN9	363 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	TLK2	Q86UE8	772 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	FAM133A	Q8N9E0	248 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	PI4K2B	Q8TCG2	481 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	SYMPK	Q92797	1274 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	TIFA	Q96CG3	184 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	EVI5L	Q96CN4	794 aa		11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	GAS2L1	Q99501	681 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	UPF3A	Q9H1J1	476 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	TTYH1	Q9H313	450 aa	Predicted RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	A1CF	Q9NQ94	594 aa	Known RBP	11.15	□□□□□ -0.62
PTPN18-209	ENST00000464576	MSRA	Q9UJ68	235 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms