RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 RESP18Q5W5W9 173 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 NEK8Q86SG6 692 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 GSPT2Q8IYD1 628 aaKnown RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 CCDC51Q96ER9 411 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 DPH5Q9H2P9 285 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 ARPP21Q9UBL0 812 aaPredicted RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 INPP5BP32019 993 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 CCT5P48643 541 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 GRIN1Q05586 938 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 CFAP221Q4G0U5 840 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 METTL16Q86W50 562 aaKnown RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 GPBP1Q86WP2 473 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 LMBR1Q8WVP7 490 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 CNKSR2Q8WXI2 1034 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 GJA10Q969M2 543 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 MRPL44Q9H9J2 332 aaKnown RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 SERPINA10Q9UK55 444 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 ZBTB22O15209 634 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 EPB41P11171 864 aaKnown RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 GUCY2DQ02846 1103 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 C2orf54Q08AI8 447 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 DOK7Q18PE1 504 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 KRT71Q3SY84 523 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 PRR16Q569H4 304 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 DPP8Q6V1X1 898 aaPredicted RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 GSTA5Q7RTV2 222 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 PEX26Q7Z412 305 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 IFT20Q8IY31 132 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 ZNF526Q8TF50 670 aaPredicted RBP10.06□□□□□ -0.8
HPS4-208ENST00000464362 CARD10Q9BWT7 1032 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 LY9Q9HBG7 655 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 HOMER2Q9NSB8 354 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 PHLPP2Q6ZVD8 1323 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 VWDEQ8N2E2 1590 aa10.06□□□□□ -0.8
HPS4-208ENST00000464362 CCDC172P0C7W6 258 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 TNFAIP3P21580 790 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 RPL13P26373 211 aaKnown RBP10.05□□□□□ -0.8
HPS4-208ENST00000464362 VPS41P49754 854 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 PPP1R7Q15435 360 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 CEP85LQ5SZL2 805 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 TPH2Q8IWU9 490 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 MYCT1Q8N699 235 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 ARFGAP2Q8N6H7 521 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 PAF1Q8N7H5 531 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 CYP2J2P51589 502 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 ST3GAL1Q11201 340 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 KIAA0825Q8IV33 1275 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 MYOCDQ8IZQ8 938 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 U2AF1L4Q8WU68 220 aaKnown RBP10.05□□□□□ -0.8
HPS4-208ENST00000464362 OSBPL5Q9H0X9 879 aaPredicted RBP10.05□□□□□ -0.8
HPS4-208ENST00000464362 CTTNBP2NLQ9P2B4 639 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 MYO1AQ9UBC5 1043 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 SRP68Q9UHB9 627 aaKnown RBP10.05□□□□□ -0.8
HPS4-208ENST00000464362 SALL3Q9BXA9 1300 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 E7EVH7 732 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 NDUFA10O95299 355 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 IL6STP40189 918 aaPredicted RBP10.05□□□□□ -0.8
HPS4-208ENST00000464362 BTDP43251 543 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 FMR1Q06787 632 aaKnown RBP eCLIP10.05□□□□□ -0.8
HPS4-208ENST00000464362 OGFOD1Q8N543 542 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 TRIM58Q8NG06 486 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 TBCKQ8TEA7 893 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 ATG3Q9NT62 314 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 HDAC6Q9UBN7 1215 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 NRKQ7Z2Y5 1582 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 SETBP1Q9Y6X0 1596 aa10.05□□□□□ -0.8
HPS4-208ENST00000464362 KIF4AO95239 1232 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 FTCDO95954 541 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 BRD2P25440 801 aaKnown RBP10.04□□□□□ -0.8
HPS4-208ENST00000464362 TUBB2AQ13885 445 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 TSGA10IPQ3SY00 556 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 FAM26FQ5R3K3 315 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 TUBB2BQ9BVA1 445 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 KANSL2Q9H9L4 492 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 DNM3Q9UQ16 869 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 CCDC151A5D8V7 595 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 CCDC169A6NNP5 214 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 EXOC3O60645 756 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 PLCG1P19174 1290 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 ANTXR2P58335 489 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 PDIA6Q15084 440 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 ENAHQ8N8S7 591 aaPredicted RBP10.04□□□□□ -0.8
HPS4-208ENST00000464362 PIGSQ96S52 555 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 EHMT1Q9H9B1 1298 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 FRMD4BQ9Y2L6 1034 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 ZNF804BA4D1E1 1349 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 GSG1L2A8MUP6 293 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 MFAP3LO75121 409 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 RNF40O75150 1001 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 MOCS3O95396 460 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 KRT5P13647 590 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 UBXN2AP68543 259 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 PABPC4Q13310 644 aaKnown RBP eCLIP10.04□□□□□ -0.8
HPS4-208ENST00000464362 CASP8Q14790 479 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 SPICE1Q8N0Z3 855 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 KIAA1024Q9UPX6 916 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 USP31Q70CQ4 1352 aa10.04□□□□□ -0.8
HPS4-208ENST00000464362 BUB1BO60566 1050 aaPredicted RBP10.04□□□□□ -0.8
HPS4-208ENST00000464362 LONP1P36776 959 aaKnown RBP10.04□□□□□ -0.8
HPS4-208ENST00000464362 MECOMQ03112 1051 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms