RNA–Protein interactions for RNA: ENST00000464273.1

PPP1CB-209, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

TSL 2

Gene PPP1CB, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-209ENST00000464273 VPS54Q9P1Q0 977 aa16.37■□□□□ 0.21
PPP1CB-209ENST00000464273 PNMA3Q9UL41 463 aa16.37■□□□□ 0.21
PPP1CB-209ENST00000464273 BTBD19C9JJ37 291 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 VWA5AO00534 786 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 NAPAP54920 295 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 INHBEP58166 350 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 NLRP5P59047 1200 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 SAFBQ15424 915 aaKnown RBP eCLIP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 FOXD4L5Q5VV16 416 aaPredicted RBP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 KRT40Q6A162 431 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 WWC2Q6AWC2 1192 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 MCTP1Q6DN14 999 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 CYP4F22Q6NT55 531 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 CPXCR1Q8N123 301 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 FBXO18Q8NFZ0 1043 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 CCDC12Q8WUD4 166 aaPredicted RBP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 FOXD4L4Q8WXT5 416 aaPredicted RBP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 COA7Q96BR5 231 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 AMNQ9BXJ7 453 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 RANBP17Q9H2T7 1088 aaKnown RBP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 GJB4Q9NTQ9 266 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 CHMP5Q9NZZ3 219 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 CIZ1Q9ULV3 898 aaPredicted RBP16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 KCNJ14Q9UNX9 436 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 PCDHA1Q9Y5I3 950 aa16.36■□□□□ 0.21
PPP1CB-209ENST00000464273 PDHXO00330 501 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 USH1GQ495M9 461 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 ANKRD23Q86SG2 305 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 SLC38A10Q9HBR0 1119 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 RAVER2Q9HCJ3 691 aaKnown RBP16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 SH3GLB2Q9NR46 395 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 BARHL2Q9NY43 387 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 PNMA2Q9UL42 364 aa16.35■□□□□ 0.21
PPP1CB-209ENST00000464273 TESPA1A2RU30 521 aaPredicted RBP16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 FAM155AB1AL88 458 aaPredicted RBP16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 hCG_1984214I3L0E3 225 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 STXBP3O00186 592 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 PLS1Q14651 629 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 ZNF713Q8N859 430 aaPredicted RBP16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 CCDC148Q8NFR7 591 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 PTPN18Q99952 460 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 CCPG1Q9ULG6 757 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 ADAMTS5Q9UNA0 930 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 SLC45A1Q9Y2W3 748 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 MYPNQ86TC9 1320 aa16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 WDR33Q9C0J8 1336 aaKnown RBP16.34■□□□□ 0.21
PPP1CB-209ENST00000464273 SMCO2A6NFE2 343 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 RASSF10A6NK89 507 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 SPDYE16A6NNV3 312 aaPredicted RBP16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 PPP1R11O60927 126 aaPredicted RBP16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 ICAM1P05362 532 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 CALML3P27482 149 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 DDIT3P35638 169 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 HERVK_113P62684 666 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 KIF23Q02241 960 aaPredicted RBP16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 SREBF2Q12772 1141 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 FAM43AQ8N2R8 423 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 MB21D1Q8N884 522 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 SMCR8Q8TEV9 937 aaPredicted RBP16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 CAPNS2Q96L46 248 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 AGBL1Q96MI9 1066 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 BRMS1Q9HCU9 246 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 C6orf50Q9HD87 102 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 MTMR6Q9Y217 621 aa16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 MRPL11Q9Y3B7 192 aaKnown RBP16.33■□□□□ 0.2
PPP1CB-209ENST00000464273 CYP2C8P10632 490 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 ALAS1P13196 640 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 GNA11P29992 359 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 STAT3P40763 770 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 MRPL12P52815 198 aaKnown RBP16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 NOGQ13253 232 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 PKP1Q13835 747 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 FAM177A1Q8N128 213 aaPredicted RBP16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 RGS22Q8NE09 1264 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 PAGR1Q9BTK6 254 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 PSTPIP2Q9H939 334 aa16.32■□□□□ 0.2
PPP1CB-209ENST00000464273 ABCB11O95342 1321 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 MMP1P03956 469 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 ZSCAN22P10073 491 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 KRT2P35908 639 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 OAZ1P54368 228 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 TMEM132BQ14DG7 1078 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 GALNT17Q6IS24 598 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 TYW1BQ6NUM6 668 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 LBX2Q6XYB7 198 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 GTF3C2Q8WUA4 911 aaPredicted RBP16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 PARK7Q99497 189 aaKnown RBP16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 PHF20Q9BVI0 1012 aa16.31■□□□□ 0.2
PPP1CB-209ENST00000464273 ZNF536O15090 1300 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 AOC2O75106 756 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 BRD1O95696 1058 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 TAL1P17542 331 aaPredicted RBP16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 TM4SF4P48230 202 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 ADCY7P51828 1080 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 HTRA3P83110 453 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 SNRNP48Q6IEG0 339 aaKnown RBP16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 PPP1R18Q6NYC8 613 aa16.3■□□□□ 0.2
PPP1CB-209ENST00000464273 FERMT3Q86UX7 667 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms