RNA–Protein interactions for RNA: ENST00000463446.1

EPHA4-210, Transcript of EPH receptor A4, humanhuman

TSL 2

Gene EPHA4, Length 579 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-210ENST00000463446 CCL15-CCL14A0A0B4J2E2 113 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 RASSF10A6NK89 507 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 BMP15O95972 392 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 CCL15Q16663 113 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 NBPF11Q86T75 865 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 CHST13Q8NET6 341 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 ZNF396Q96N95 335 aaPredicted RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 MYL10Q9BUA6 226 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 BEGAINQ9BUH8 593 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 UBA5Q9GZZ9 404 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 RANBP17Q9H2T7 1088 aaKnown RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 MROH8Q9H579 483 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 PSTPIP2Q9H939 334 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 JMJD4Q9H9V9 463 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 SENP2Q9HC62 589 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 ZFYVE28Q9HCC9 887 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 NCOA5Q9HCD5 579 aaKnown RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 NOL7Q9UMY1 257 aaKnown RBP8.51□□□□□ -1.05
EPHA4-210ENST00000463446 CEP131Q9UPN4 1083 aa8.51□□□□□ -1.05
EPHA4-210ENST00000463446 LOC102724159A0A0B4J2E5 919 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 SMCO2A6NFE2 343 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 PDHXO00330 501 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 VWA5AO00534 786 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 CA12O43570 354 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 CD2BP2O95400 341 aaKnown RBP8.5□□□□□ -1.05
EPHA4-210ENST00000463446 SLC10A3P09131 477 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 GOLGA8HP0CJ92 632 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 RXRAP19793 462 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 SYT1P21579 422 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 KRT2P35908 639 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 STAT3P40763 770 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 TRAPPC10P48553 1259 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 NAPAP54920 295 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 JAG1P78504 1218 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 PWP2Q15269 919 aaKnown RBP8.5□□□□□ -1.05
EPHA4-210ENST00000463446 PAXIP1Q6ZW49 1069 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-210ENST00000463446 HEATR3Q7Z4Q2 680 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 STAG2Q8N3U4 1231 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 GPRC5AQ8NFJ5 357 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 DDX11Q96FC9 970 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 CLMNQ96JQ2 1002 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 MS4A4AQ96JQ5 239 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 GBP4Q96PP9 640 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 TEX13BQ9BXU2 312 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 ZMYND12Q9H0C1 365 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 SLC38A10Q9HBR0 1119 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 ADAMTSL1Q8N6G6 1762 aa8.5□□□□□ -1.05
EPHA4-210ENST00000463446 FRMPD2Q68DX3 1309 aaPredicted RBP8.5□□□□□ -1.05
EPHA4-210ENST00000463446 CCDC194A0A1B0GVG4 234 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 GCOM1H8Y6P7 765 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 PIK3CDO00329 1044 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 CTDNEP1O95476 244 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 MMP1P03956 469 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 POLR2MP0CAP2 368 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ZSCAN22P10073 491 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 USP11P51784 963 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ADCY7P51828 1080 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 FUT2Q10981 343 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 AP3B2Q13367 1082 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ORC2Q13416 577 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 KIF22Q14807 665 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 CDC37Q16543 378 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 RILPL1Q5EBL4 403 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 MCTP1Q6DN14 999 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 XRRA1Q6P2D8 792 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 MOB2Q70IA6 237 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 KRT25Q7Z3Z0 450 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 HOMER1Q86YM7 354 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ABRAQ8N0Z2 381 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 JMYQ8N9B5 988 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 DAGLBQ8NCG7 672 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 SHCBP1Q8NEM2 672 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 PHKBQ93100 1093 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 PIGSQ96S52 555 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 SCAND2PQ9GZW5 306 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ASCC2Q9H1I8 757 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 RIC8AQ9NPQ8 531 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
EPHA4-210ENST00000463446 CCPG1Q9ULG6 757 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 PCDHA4Q9UN74 947 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 IVNS1ABPQ9Y6Y0 642 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 PFASO15067 1338 aa8.49□□□□□ -1.05
EPHA4-210ENST00000463446 SPDYE3A6NKU9 549 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 MAFGO15525 162 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 STAM2O75886 525 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 PLEKHA8P1O95397 391 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 LARGE1O95461 756 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 GNRH1P01148 92 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 U2AF2P26368 475 aaKnown RBP eCLIP8.48□□□□□ -1.05
EPHA4-210ENST00000463446 HOXD10P28358 340 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 MAPK4P31152 587 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 SLC16A2P36021 539 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 HERVK_113P62684 666 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 MAP2K1Q02750 393 aaPredicted RBP8.48□□□□□ -1.05
EPHA4-210ENST00000463446 QRICH1Q2TAL8 776 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 KRT40Q6A162 431 aa8.48□□□□□ -1.05
EPHA4-210ENST00000463446 TTBK2Q6IQ55 1244 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms