RNA–Protein interactions for RNA: ENST00000463369.5

SHQ1-203, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 2 BASIC

Gene SHQ1, Length 2,065 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-203ENST00000463369 ERLIN2O94905 339 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 PDE8BO95263 885 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 NPR1P16066 1061 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CD53P19397 219 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 MAPK1P28482 360 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 SCRN1Q12765 414 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CFAP100Q494V2 611 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 PCGF5Q86SE9 256 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 AACSQ86V21 672 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CCDC12Q8WUD4 166 aaPredicted RBP9.79□□□□□ -0.84
SHQ1-203ENST00000463369 FAM204AQ9H8W3 233 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 SUGCTQ9HAC7 445 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 RTEL1Q9NZ71 1219 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 FRMD4BQ9Y2L6 1034 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 BBOX1O75936 387 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 USP17L8P0C7I0 530 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 HNRNPH1P31943 449 aaKnown RBP9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CHRNDQ07001 517 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 TBX2Q13207 712 aaPredicted RBP9.79□□□□□ -0.84
SHQ1-203ENST00000463369 WWC2Q6AWC2 1192 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 Q6ZUG5 572 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 TOGARAM2Q6ZUX3 1019 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 MASTLQ96GX5 879 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 NEK1Q96PY6 1258 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 EPAS1Q99814 870 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 GBP3Q9H0R5 595 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CCDC8Q9H0W5 538 aaPredicted RBP9.79□□□□□ -0.84
SHQ1-203ENST00000463369 PLEKHA4Q9H4M7 779 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CDC23Q9UJX2 597 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 MINPP1Q9UNW1 487 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 CHD4Q14839 1912 aa9.79□□□□□ -0.84
SHQ1-203ENST00000463369 A0A0D9SFI3 127 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA6CA6NDK9 693 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA6BA6NDN3 693 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TTC36A6NLP5 189 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TMEM232C9JQI7 657 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 H0YIN7 160 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 MYO1BO43795 1136 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 PFKFB2O60825 505 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 PHACTR2O75167 634 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TUBBP07437 444 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA6DP0CG33 693 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 ALDH1B1P30837 517 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TIMM10P62072 90 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TUBB2AQ13885 445 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 NSUN7Q8NE18 718 aaKnown RBP9.78□□□□□ -0.84
SHQ1-203ENST00000463369 KAT2BQ92831 832 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TUBB2BQ9BVA1 445 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 GOLGA6AQ9NYA3 693 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 MED23Q9ULK4 1368 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 ZNF202O95125 648 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 USP8P40818 1118 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 MNAT1P51948 309 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 C2CD5Q86YS7 1000 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 PDILTQ8N807 584 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 C8orf48Q96LL4 319 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 ASB16Q96NS5 453 aa9.78□□□□□ -0.84
SHQ1-203ENST00000463369 PUF60Q9UHX1 559 aaKnown RBP9.78□□□□□ -0.84
SHQ1-203ENST00000463369 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
SHQ1-203ENST00000463369 TAF5LO75529 589 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 CTDNEP1O95476 244 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 FGFR2P21802 821 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 AARSP49588 968 aaKnown RBP eCLIP9.77□□□□□ -0.85
SHQ1-203ENST00000463369 VSNL1P62760 191 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 MYL5Q02045 173 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 PUM3Q15397 648 aaKnown RBP9.77□□□□□ -0.85
SHQ1-203ENST00000463369 EAPPQ56P03 285 aaPredicted RBP9.77□□□□□ -0.85
SHQ1-203ENST00000463369 STYK1Q6J9G0 422 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 TMC4Q7Z404 712 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 AFAP1L1Q8TED9 768 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 MS4A4AQ96JQ5 239 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 CHST12Q9NRB3 414 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 TLR7Q9NYK1 1049 aaKnown RBP9.77□□□□□ -0.85
SHQ1-203ENST00000463369 CTDP1Q9Y5B0 961 aaPredicted RBP9.77□□□□□ -0.85
SHQ1-203ENST00000463369 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
SHQ1-203ENST00000463369 CCDC88AQ3V6T2 1871 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 PTPDC1A2A3K4 754 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 LRRIQ3A6PVS8 624 aaPredicted RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 RNF40O75150 1001 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 PRPF6O94906 941 aaKnown RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 SYF2O95926 243 aaKnown RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 PTGER2P43116 358 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 SATB1Q01826 763 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 KARSQ15046 597 aaKnown RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 QPCTQ16769 361 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 TC2NQ8N9U0 490 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 ENOX1Q8TC92 643 aaKnown RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 CEP63Q96MT8 703 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 DBNDD2Q9BQY9 259 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 IRX2Q9BZI1 471 aaPredicted RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 ANKRD2Q9GZV1 360 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 VIPAS39Q9H9C1 493 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 SCINQ9Y6U3 715 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 TNFRSF10BO14763 440 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 LIG3P49916 1009 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 POU5F1Q01860 360 aaKnown RBP9.76□□□□□ -0.85
SHQ1-203ENST00000463369 PTPN21Q16825 1174 aa9.76□□□□□ -0.85
SHQ1-203ENST00000463369 ISM2Q6H9L7 571 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms