RNA–Protein interactions for RNA: ENST00000463328.5

TRA2B-207, Transcript of transformer 2 beta homolog, humanhuman

TSL 2

Gene TRA2B, Length 2,780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-207ENST00000463328 NKAPQ8N5F7 415 aaKnown RBP6.12□□□□□ -1.43
TRA2B-207ENST00000463328 NAT8LQ8N9F0 302 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 TRIML1Q8N9V2 468 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 NKX2-3Q8TAU0 364 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
TRA2B-207ENST00000463328 TRIM8Q9BZR9 551 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 NUCKS1Q9H1E3 243 aaKnown RBP6.12□□□□□ -1.43
TRA2B-207ENST00000463328 RBSNQ9H1K0 784 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 CCDC87Q9NVE4 849 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 MIS18AQ9NYP9 233 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 FBXL5Q9UKA1 691 aa6.12□□□□□ -1.43
TRA2B-207ENST00000463328 PNMA8BQ9ULN7 279 aaPredicted RBP6.12□□□□□ -1.43
TRA2B-207ENST00000463328 AOX1Q06278 1338 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 XIRP1Q702N8 1843 aaKnown RBP6.11□□□□□ -1.43
TRA2B-207ENST00000463328 FAM25EA8MYX2 175 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 F8W031 263 aaPredicted RBP6.11□□□□□ -1.43
TRA2B-207ENST00000463328 RNMTO43148 476 aaKnown RBP6.11□□□□□ -1.43
TRA2B-207ENST00000463328 TMCC2O75069 709 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 IFIT1P09914 478 aaKnown RBP6.11□□□□□ -1.43
TRA2B-207ENST00000463328 COX10Q12887 443 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 RILPL1Q5EBL4 403 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 NUGGCQ68CJ6 796 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 CARNMT1Q8N4J0 409 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 UPF1Q92900 1129 aaKnown RBP eCLIP6.11□□□□□ -1.435e-10■■□□□ 13.8
TRA2B-207ENST00000463328 ATP6V1E2Q96A05 226 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 MEIS3Q99687 375 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 ANKEF1Q9NU02 776 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 SALL3Q9BXA9 1300 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 ZNF335Q9H4Z2 1342 aaPredicted RBP6.11□□□□□ -1.43
TRA2B-207ENST00000463328 PKD1L3Q7Z443 1732 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 SEPHS1P49903 392 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 GABREP78334 506 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 MYBPC3Q14896 1274 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 ELF2Q15723 593 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 GFOD2Q3B7J2 385 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 STRA8Q7Z7C7 330 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 TEX9Q8N6V9 391 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 TEKT1Q969V4 418 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 YIPF4Q9BSR8 244 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 SRCIN1Q9C0H9 1055 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 PDCL3Q9H2J4 239 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 ZNF180Q9UJW8 692 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 MKL2Q9ULH7 1088 aa6.11□□□□□ -1.43
TRA2B-207ENST00000463328 IQCA1LA6NCM1 817 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 FAM155AB1AL88 458 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 TNFRSF21O75509 655 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 CD4P01730 458 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 MMEP08473 750 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 NEFHP12036 1026 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 KRT20P35900 424 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 NAA30Q147X3 362 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 RABL6Q3YEC7 729 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 TM4SF20Q53R12 229 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 LDHAL6AQ6ZMR3 332 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 RNF180Q86T96 592 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 TRIM22Q8IYM9 498 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 SIX5Q8N196 739 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 LSMEM1Q8N8F7 131 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 ZNF454Q8N9F8 522 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 OR8H1Q8NGG4 311 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 GSDMBQ8TAX9 411 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 SSH3Q8TE77 659 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 BAP1Q92560 729 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 DESI2Q9BSY9 194 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 FANCFQ9NPI8 374 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 AASDHPPTQ9NRN7 309 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 ZFATQ9P243 1243 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 MRC1P22897 1456 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 SRCAPQ6ZRS2 3230 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 PARP4Q9UKK3 1724 aaKnown RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 SGTAO43765 313 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 MBD4O95243 580 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 SETSIPP0DME0 302 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 CAPN2P17655 700 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 DDIT3P35638 169 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 DGKGP49619 791 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 MTX1Q13505 466 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 HS2ST1Q7LGA3 356 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 C7orf61Q8IZ16 206 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 CHAC2Q8WUX2 184 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 LRRC59Q96AG4 307 aaKnown RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 RBM18Q96H35 190 aaKnown RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 USP44Q9H0E7 712 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 DBF4Q9UBU7 674 aaPredicted RBP6.1□□□□□ -1.43
TRA2B-207ENST00000463328 AXIN2Q9Y2T1 843 aa6.1□□□□□ -1.43
TRA2B-207ENST00000463328 LINC00854A0A1B0GVQ3 168 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 SERTM1A2A2V5 107 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 BTBD11A6QL63 1104 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 K7ENM7 598 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 GSPT1P15170 499 aaKnown RBP6.09□□□□□ -1.43
TRA2B-207ENST00000463328 SH3BGRP55822 239 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-207ENST00000463328 PLCB3Q01970 1234 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 CACNB2Q08289 660 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-207ENST00000463328 FKBP5Q13451 457 aaPredicted RBP6.09□□□□□ -1.43
TRA2B-207ENST00000463328 TRIM14Q14142 442 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 INF2Q27J81 1249 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 VPS52Q8N1B4 723 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 USHBP1Q8N6Y0 703 aa6.09□□□□□ -1.43
TRA2B-207ENST00000463328 THAP11Q96EK4 314 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms