RNA–Protein interactions for RNA: ENST00000463222.1

VRK2-208, Transcript of vaccinia related kinase 2, humanhuman

TSL 3

Gene VRK2, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-208ENST00000463222 NEK4P51957 841 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 GFRA1P56159 465 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 ODR4Q5SWX8 454 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 DDX46Q7L014 1031 aaKnown RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 TMEM145Q8NBT3 493 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 WFDC12Q8WWY7 111 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 KCTD13Q8WZ19 329 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 SCLYQ96I15 445 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 FAM46AQ96IP4 442 aaKnown RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 CEP89Q96ST8 783 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 DSCC1Q9BVC3 393 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 SSBP4Q9BWG4 385 aaPredicted RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 INTS7Q9NVH2 962 aaKnown RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 MCM8Q9UJA3 840 aa6.29□□□□□ -1.4
VRK2-208ENST00000463222 GPR55Q9Y2T6 319 aaPredicted RBP6.29□□□□□ -1.4
VRK2-208ENST00000463222 WASHC2CQ9Y4E1 1318 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 OPA1O60313 960 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 CBX7O95931 251 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 EOMESO95936 686 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 BMP3P12645 472 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 GABREP78334 506 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 MAP7Q14244 749 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 ZNF460Q14592 562 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 NFKBIBQ15653 356 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 TRIM61Q5EBN2 209 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 SEZ6L2Q6UXD5 910 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 USP53Q70EK8 1073 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 FMNL3Q8IVF7 1028 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 RAVER1Q8IY67 606 aaKnown RBP6.28□□□□□ -1.4
VRK2-208ENST00000463222 AFAP1L2Q8N4X5 818 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 EZH1Q92800 747 aaPredicted RBP6.28□□□□□ -1.4
VRK2-208ENST00000463222 YIPF2Q9BWQ6 316 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 CHMP4AQ9BY43 222 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 MTFR1LQ9H019 292 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 NKX2-4Q9H2Z4 354 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 C1GALT1Q9NS00 363 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 TRAF6Q9Y4K3 522 aa6.28□□□□□ -1.4
VRK2-208ENST00000463222 ASXL2Q76L83 1435 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 H0Y8X5 98 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 KPNA6O60684 536 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 CYP7A1P22680 504 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 MAP4P27816 1152 aaKnown RBP6.27□□□□□ -1.41
VRK2-208ENST00000463222 AMPD2Q01433 879 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 CYP4F3Q08477 520 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 STRN3Q13033 797 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 DENND5AQ6IQ26 1287 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 KCNT2Q6UVM3 1135 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 AHI1Q8N157 1196 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 GSTCDQ8NEC7 633 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 PTPRN2Q92932 1015 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 Q96M66 194 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 CYP26B1Q9NR63 512 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 THRAP3Q9Y2W1 955 aaKnown RBP6.27□□□□□ -1.41
VRK2-208ENST00000463222 PCDHA9Q9Y5H5 950 aa6.27□□□□□ -1.41
VRK2-208ENST00000463222 FAM95CA0A1B0GW59 222 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 HYAL3O43820 417 aaPredicted RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 EFCAB14O75071 495 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 RASGRP1O95267 797 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 PRAMEF1O95521 474 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 GUCY2FP51841 1108 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 EXOSC10Q01780 885 aaKnown RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 MAP4K2Q12851 820 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 WWC2Q6AWC2 1192 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 PKN3Q6P5Z2 889 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 Q6ZS46 218 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 LHFPL2Q6ZUX7 228 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 ARMC10Q8N2F6 343 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 UTP4Q969X6 686 aaKnown RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 MAGEB10Q96LZ2 347 aaPredicted RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 MCMBPQ9BTE3 642 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 DUSP23Q9BVJ7 150 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 KCNF1Q9H3M0 494 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 GPRC5CQ9NQ84 441 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 CHST7Q9NS84 486 aa6.26□□□□□ -1.41
VRK2-208ENST00000463222 SF3B6Q9Y3B4 125 aaKnown RBP6.26□□□□□ -1.41
VRK2-208ENST00000463222 KATNA1O75449 491 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 EYA4O95677 639 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 ASLP04424 464 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 FAM87AP0C7U9 286 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 JMJD7P0C870 316 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 ITIH2P19823 946 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 SCRN1Q12765 414 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 GRB10Q13322 594 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 SEPT7Q16181 437 aaKnown RBP6.25□□□□□ -1.41
VRK2-208ENST00000463222 CFAP100Q494V2 611 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 SLC35F1Q5T1Q4 408 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 SFRP5Q5T4F7 317 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 PPM1KQ8N3J5 372 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 DTWD2Q8NBA8 298 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 KREMEN2Q8NCW0 462 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 TP53INP1Q96A56 240 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 C1orf159Q96HA4 380 aa6.25□□□□□ -1.41
VRK2-208ENST00000463222 TCRBV16S1A1N1A0A5B0 115 aa6.24□□□□□ -1.41
VRK2-208ENST00000463222 SHISA3A0PJX4 238 aa6.24□□□□□ -1.41
VRK2-208ENST00000463222 PRR33A8MZF0 331 aa6.24□□□□□ -1.41
VRK2-208ENST00000463222 ALG1L2C9J202 215 aa6.24□□□□□ -1.41
VRK2-208ENST00000463222 SIGLEC6O43699 453 aa6.24□□□□□ -1.41
VRK2-208ENST00000463222 CRTAMO95727 393 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms