RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 PFASO15067 1338 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 SALL3Q9BXA9 1300 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 ASB14A6NK59 587 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 B4DLN1 442 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 MRPL12P52815 198 aaKnown RBP10.43□□□□□ -0.74
LDB1-203ENST00000461873 TRDNQ13061 729 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 LRRC26Q2I0M4 334 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 ZNF467Q7Z7K2 595 aaPredicted RBP10.43□□□□□ -0.74
LDB1-203ENST00000461873 PLEKHM2Q8IWE5 1019 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 TTC14Q96N46 770 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 TRERF1Q96PN7 1200 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 ABHD16BQ9H3Z7 469 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 OSBPL3Q9H4L5 887 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 CCPG1Q9ULG6 757 aa10.43□□□□□ -0.74
LDB1-203ENST00000461873 GREB1LQ9C091 1923 aaPredicted RBP10.43□□□□□ -0.74
LDB1-203ENST00000461873 ZMYM6O95789 1325 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 DHX16O60231 1041 aaKnown RBP10.42□□□□□ -0.74
LDB1-203ENST00000461873 ZEB2O60315 1214 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 NMT2O60551 498 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 PLA2G6O60733 806 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 IGHDP01880 384 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 COL6A1P12109 1028 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 BMP8BP34820 402 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 ADCYAP1R1P41586 468 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 MAGEA10P43363 369 aaPredicted RBP10.42□□□□□ -0.74
LDB1-203ENST00000461873 RTP1P59025 263 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 MDM2Q00987 491 aaPredicted RBP10.42□□□□□ -0.74
LDB1-203ENST00000461873 LRRC41Q15345 812 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 SLC39A5Q6ZMH5 540 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 PCSK9Q8NBP7 692 aaKnown RBP10.42□□□□□ -0.74
LDB1-203ENST00000461873 TRPV1Q8NER1 839 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 REPS2Q8NFH8 660 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 FERMT2Q96AC1 680 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 UBAC1Q9BSL1 405 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 KRT23Q9C075 422 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 KAT14Q9H8E8 782 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 CNNM2Q9H8M5 875 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 ADD3Q9UEY8 706 aaKnown RBP10.42□□□□□ -0.74
LDB1-203ENST00000461873 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.42□□□□□ -0.74
LDB1-203ENST00000461873 RIPK3Q9Y572 518 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 FRMPD3Q5JV73 1810 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 CEP290O15078 2479 aa10.42□□□□□ -0.74
LDB1-203ENST00000461873 ERICH2A1L162 156 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 ABCB7O75027 752 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 PGK1P00558 417 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 C6orf222P0C671 652 aaPredicted RBP10.41□□□□□ -0.74
LDB1-203ENST00000461873 ATXN8OSP0DMR3 200 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 MNX1P50219 401 aaPredicted RBP10.41□□□□□ -0.74
LDB1-203ENST00000461873 ACVR2BQ13705 512 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 NSMFQ6X4W1 530 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 TDHQ8IZJ6 230 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 AGBL1Q96MI9 1066 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 GLT1D1Q96MS3 346 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 TMEM47Q9BQJ4 181 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 GPCPD1Q9NPB8 672 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 INCENPQ9NQS7 918 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 STARD7Q9NQZ5 370 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 TCP11L1Q9NUJ3 509 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.41□□□□□ -0.74
LDB1-203ENST00000461873 PRR12Q9ULL5 1215 aa10.41□□□□□ -0.74
LDB1-203ENST00000461873 MROH7Q68CQ1 1323 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 FRMPD2Q68DX3 1309 aaPredicted RBP10.4□□□□□ -0.74
LDB1-203ENST00000461873 SMCHD1A6NHR9 2005 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 PTPDC1A2A3K4 754 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 MOXD2PA6NHM9 499 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 DCDC2CA8MYV0 355 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 DUSP11O75319 330 aaKnown RBP10.4□□□□□ -0.74
LDB1-203ENST00000461873 GPATCH4Q5T3I0 446 aaKnown RBP10.4□□□□□ -0.74
LDB1-203ENST00000461873 SYDE2Q5VT97 1194 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 MAMDC4Q6UXC1 1216 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 ARMCX2Q7L311 632 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 ZNF589Q86UQ0 364 aaPredicted RBP10.4□□□□□ -0.74
LDB1-203ENST00000461873 GDF15Q99988 308 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 TSEN34Q9BSV6 310 aaKnown RBP10.4□□□□□ -0.74
LDB1-203ENST00000461873 IL17RBQ9NRM6 502 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 GTF3C3Q9Y5Q9 886 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 TACC3Q9Y6A5 838 aa10.4□□□□□ -0.74
LDB1-203ENST00000461873 ALPK3Q96L96 1907 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 TLR3O15455 904 aaKnown RBP10.39□□□□□ -0.75
LDB1-203ENST00000461873 PQBP1O60828 265 aaKnown RBP10.39□□□□□ -0.75
LDB1-203ENST00000461873 ICAM1P05362 532 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 ZNF865P0CJ78 1059 aaPredicted RBP10.39□□□□□ -0.75
LDB1-203ENST00000461873 SLC16A2P36021 539 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 SNAP25P60880 206 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 SART3Q15020 963 aaKnown RBP10.39□□□□□ -0.75
LDB1-203ENST00000461873 CCDC144BQ3MJ40 725 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 TRIM60Q495X7 471 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 BRDTQ58F21 947 aaPredicted RBP10.39□□□□□ -0.75
LDB1-203ENST00000461873 GNASQ5JWF2 1037 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 DGKHQ86XP1 1220 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 CCDC144CPQ8IYA2 1237 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 ZKSCAN3Q9BRR0 538 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 DSCC1Q9BVC3 393 aa10.39□□□□□ -0.75
LDB1-203ENST00000461873 DNAJC25-GNG10A0A024R161 153 aa10.38□□□□□ -0.75
LDB1-203ENST00000461873 KDM4AO75164 1064 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms