RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 ANKRD13AQ8IZ07 590 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 C7orf61Q8IZ16 206 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 LILRB2Q8N423 598 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 ZBTB38Q8NAP3 1195 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 BORCS6Q96GS4 357 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 RCC1LQ96I51 464 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 AARSD1Q9BTE6 412 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 ASCC2Q9H1I8 757 aaPredicted RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 LRP2BPQ9P2M1 347 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 PFDN2Q9UHV9 154 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 PCDHB10Q9UN67 800 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.38□□□□□ -1.71
HDAC6-212ENST00000461608 SUGT1Q9Y2Z0 365 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 PTCH2Q9Y6C5 1203 aa4.38□□□□□ -1.71
HDAC6-212ENST00000461608 ESYT3A0FGR9 886 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 C9IYK1 514 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 TMEM253P0C7T8 217 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 IBSPP21815 317 aaPredicted RBP4.37□□□□□ -1.71
HDAC6-212ENST00000461608 PRKCQQ04759 706 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 AXDND1Q5T1B0 1012 aaPredicted RBP4.37□□□□□ -1.71
HDAC6-212ENST00000461608 SFRP5Q5T4F7 317 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 TOP6BLQ8N6T0 577 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 BVESQ8NE79 360 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 PIWIL2Q8TC59 973 aaKnown RBP4.37□□□□□ -1.71
HDAC6-212ENST00000461608 SYTL5Q8TDW5 730 aaPredicted RBP4.37□□□□□ -1.71
HDAC6-212ENST00000461608 VWCEQ96DN2 955 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 HRASLS5Q96KN8 279 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 DUSP23Q9BVJ7 150 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 MKNK2Q9HBH9 465 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 PLAGL2Q9UPG8 496 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 SF3B6Q9Y3B4 125 aaKnown RBP4.37□□□□□ -1.71
HDAC6-212ENST00000461608 FHOD1Q9Y613 1164 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 SBNO2Q9Y2G9 1366 aa4.37□□□□□ -1.71
HDAC6-212ENST00000461608 DNAJC25-GNG10A0A024R161 153 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 IGF2BP3O00425 579 aaKnown RBP eCLIP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 SHOXO15266 292 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 ADCY3O60266 1144 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 DIAPH1O60610 1272 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 TP53P04637 393 aaPredicted RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 APPP05067 770 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 INHBBP09529 407 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 FGFR1P11362 822 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 ENDOUP21128 410 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 AFMP43652 599 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 SUMO1P63165 101 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 SQSTM1Q13501 440 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 NOL9Q5SY16 702 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 DCAF15Q66K64 600 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 SLC23A3Q6PIS1 610 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 ADAT2Q7Z6V5 191 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 ZNF227Q86WZ6 799 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 LRRN4CLQ8ND94 238 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 ENOX1Q8TC92 643 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 GP6Q9HCN6 339 aa4.36□□□□□ -1.71
HDAC6-212ENST00000461608 DIS3Q9Y2L1 958 aaKnown RBP4.36□□□□□ -1.71
HDAC6-212ENST00000461608 A0A1W2PQU0 124 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 GNAT3A8MTJ3 354 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 SIGLEC6O43699 453 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 DNAJC6O75061 913 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 RFPL3O75679 317 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 EOMESO95936 686 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 OXCT1P55809 520 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 PPP2R2AP63151 447 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 IFI16Q16666 785 aaKnown RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 AOC3Q16853 763 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 FNDC3BQ53EP0 1204 aaKnown RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 ERICH6BQ5W0A0 696 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 LCNL1Q6ZST4 164 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 CDH24Q86UP0 819 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 TRIM59Q8IWR1 403 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 MFSD4AQ8N468 514 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 ARHGEF39Q8N4T4 335 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 FLAD1Q8NFF5 587 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 PPP1R14AQ96A00 147 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 ZNF512BQ96KM6 892 aaPredicted RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 CCDC140Q96MF4 163 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 HEXIM2Q96MH2 286 aaKnown RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 CDC6Q99741 560 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 DSCC1Q9BVC3 393 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 MRPL4Q9BYD3 311 aaKnown RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 TRIT1Q9H3H1 467 aaKnown RBP4.35□□□□□ -1.71
HDAC6-212ENST00000461608 SPC25Q9HBM1 224 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 PRDM7Q9NQW5 492 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 SUSD2Q9UGT4 822 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 FBXL21Q9UKT6 434 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 AKT3Q9Y243 479 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 EMC9Q9Y3B6 208 aa4.35□□□□□ -1.71
HDAC6-212ENST00000461608 TMEM265A0A087WTH1 108 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 TRBV23-1A0A0A0MS06 115 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 TCAF2A6NFQ2 919 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 PLD2O14939 933 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 ASMTLO95671 621 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 CPP00450 1065 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 MAP4K2Q12851 820 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 FAM214BQ7L5A3 538 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 SCUBE1Q8IWY4 988 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 ZNF513Q8N8E2 541 aaPredicted RBP4.34□□□□□ -1.71
HDAC6-212ENST00000461608 DTWD2Q8NBA8 298 aa4.34□□□□□ -1.71
HDAC6-212ENST00000461608 FBXO15Q8NCQ5 510 aaPredicted RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms