RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 MYPNQ86TC9 1320 aa11.29□□□□□ -0.6
C9orf78-203ENST00000461539 VEGFBP49765 207 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 TRIM29Q14134 588 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 PKN1Q16512 942 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 IFNL1Q8IU54 200 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 MB21D1Q8N884 522 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 GPKOWQ92917 476 aaPredicted RBP eCLIP11.28□□□□□ -0.6
C9orf78-203ENST00000461539 AIFM3Q96NN9 605 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 AMNQ9BXJ7 453 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 SLC38A10Q9HBR0 1119 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 CWC22Q9HCG8 908 aaKnown RBP11.28□□□□□ -0.6
C9orf78-203ENST00000461539 RAVER2Q9HCJ3 691 aaKnown RBP11.28□□□□□ -0.6
C9orf78-203ENST00000461539 CCPG1Q9ULG6 757 aa11.28□□□□□ -0.6
C9orf78-203ENST00000461539 WDR33Q9C0J8 1336 aaKnown RBP11.28□□□□□ -0.6
C9orf78-203ENST00000461539 PPP1R11O60927 126 aaPredicted RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 TAL1P17542 331 aaPredicted RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 XBP1P17861 261 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 TM4SF4P48230 202 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 NAPAP54920 295 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 TRAF1Q13077 416 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 PLS1Q14651 629 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 TAF1CQ15572 869 aaPredicted RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 USH1GQ495M9 461 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 LARP1BQ659C4 914 aaKnown RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 WWC2Q6AWC2 1192 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 LBX2Q6XYB7 198 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 GTF3C2Q8WUA4 911 aaPredicted RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 COA7Q96BR5 231 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 C8orf76Q96K31 380 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 VPS54Q9P1Q0 977 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 PNMA2Q9UL42 364 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 PCDHA1Q9Y5I3 950 aa11.27□□□□□ -0.61
C9orf78-203ENST00000461539 GREB1LQ9C091 1923 aaPredicted RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 POLR2AP24928 1970 aaKnown RBP11.27□□□□□ -0.61
C9orf78-203ENST00000461539 DOCK1Q14185 1865 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 H3BQV1 296 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 hCG_1984214I3L0E3 225 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 ICAM1P05362 532 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 ALAS1P13196 640 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 PDCP20941 246 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 MAP2K2P36507 400 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 STAT3P40763 770 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 OAZ1P54368 228 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 NLRP5P59047 1200 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 GUCY1B3Q02153 619 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 TMEM132BQ14DG7 1078 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 IFFO2Q5TF58 517 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 REM2Q8IYK8 340 aaPredicted RBP11.26□□□□□ -0.61
C9orf78-203ENST00000461539 ZNF713Q8N859 430 aaPredicted RBP11.26□□□□□ -0.61
C9orf78-203ENST00000461539 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
C9orf78-203ENST00000461539 AGBL1Q96MI9 1066 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 TEX13BQ9BXU2 312 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 GJB4Q9NTQ9 266 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 BTBD7Q9P203 1132 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 ADAMTS5Q9UNA0 930 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 RABGAP1Q9Y3P9 1069 aa11.26□□□□□ -0.61
C9orf78-203ENST00000461539 VPS37CA5D8V6 355 aaPredicted RBP11.25□□□□□ -0.61
C9orf78-203ENST00000461539 STXBP3O00186 592 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 PEX10O60683 326 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 ALDH1A1P00352 501 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 GCLCP48506 637 aaPredicted RBP11.25□□□□□ -0.61
C9orf78-203ENST00000461539 KRT40Q6A162 431 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 SNRNP48Q6IEG0 339 aaKnown RBP11.25□□□□□ -0.61
C9orf78-203ENST00000461539 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 ANKRD13CQ8N6S4 541 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 CCDC148Q8NFR7 591 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 TXNRD2Q9NNW7 524 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 RBPJLQ9UBG7 517 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 CPA4Q9UI42 421 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 ZNF214Q9UL59 606 aaPredicted RBP11.25□□□□□ -0.61
C9orf78-203ENST00000461539 KCNJ14Q9UNX9 436 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 MRPL11Q9Y3B7 192 aaKnown RBP11.25□□□□□ -0.61
C9orf78-203ENST00000461539 ZNF536O15090 1300 aa11.25□□□□□ -0.61
C9orf78-203ENST00000461539 SMCO2A6NFE2 343 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 ATP2A1O14983 1001 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 CNMDO75829 334 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 SYT1P21579 422 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 SAFBQ15424 915 aaKnown RBP eCLIP11.24□□□□□ -0.61
C9orf78-203ENST00000461539 TYW1BQ6NUM6 668 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 CCAR1Q8IX12 1150 aaKnown RBP11.24□□□□□ -0.61
C9orf78-203ENST00000461539 GPRC5AQ8NFJ5 357 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 FBXO18Q8NFZ0 1043 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 TRERF1Q96PN7 1200 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 RNF146Q9NTX7 359 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 ABCB11O95342 1321 aa11.24□□□□□ -0.61
C9orf78-203ENST00000461539 CA12O43570 354 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 STX6O43752 255 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 CALML3P27482 149 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 GNA11P29992 359 aa11.23□□□□□ -0.61
C9orf78-203ENST00000461539 ADCY7P51828 1080 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms