RNA–Protein interactions for RNA: ENST00000461446.1

SYN3-206, Transcript of synapsin III, humanhuman

TSL 2

Gene SYN3, Length 713 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-206ENST00000461446 ZNF214Q9UL59 606 aaPredicted RBP11.88□□□□□ -0.51
SYN3-206ENST00000461446 MTMR7Q9Y216 660 aa11.88□□□□□ -0.51
SYN3-206ENST00000461446 SH2B2O14492 632 aaPredicted RBP11.87□□□□□ -0.51
SYN3-206ENST00000461446 STRNO43815 780 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 HOXC6P09630 235 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 PDHBP11177 359 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 BMP3P12645 472 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 CASTP20810 708 aaKnown RBP11.87□□□□□ -0.51
SYN3-206ENST00000461446 RPS6KB1P23443 525 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 SLC1A4P43007 532 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 SLC4A3P48751 1232 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 RUFY3Q7L099 469 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 RIOX2Q8IUF8 465 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 CPXCR1Q8N123 301 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 PNMA1Q8ND90 353 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 TCEANC2Q96MN5 208 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 LRRC2Q9BYS8 371 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 C22orf23Q9BZE7 217 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 UPF2Q9HAU5 1272 aaKnown RBP11.87□□□□□ -0.51
SYN3-206ENST00000461446 LY9Q9HBG7 655 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 ISY1Q9ULR0 285 aaKnown RBP11.87□□□□□ -0.51
SYN3-206ENST00000461446 RIPK3Q9Y572 518 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 CYP46A1Q9Y6A2 500 aa11.87□□□□□ -0.51
SYN3-206ENST00000461446 SLC25A27O95847 323 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 IGHA2P01877 340 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 PGK2P07205 417 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 SNHG28P0DPA3 235 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 FCER1AP12319 257 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 RBM25P49756 843 aaKnown RBP11.86□□□□□ -0.51
SYN3-206ENST00000461446 MFSD14CQ5VZR4 134 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 KCTD1Q719H9 257 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 FBXL16Q8N461 479 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 PRPF38AQ8NAV1 312 aaKnown RBP11.86□□□□□ -0.51
SYN3-206ENST00000461446 TRPV1Q8NER1 839 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 DCAF4Q8WV16 495 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 DPF3Q92784 378 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 PAWRQ96IZ0 340 aaKnown RBP11.86□□□□□ -0.51
SYN3-206ENST00000461446 MMP19Q99542 508 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 UPF3BQ9BZI7 483 aaKnown RBP11.86□□□□□ -0.51
SYN3-206ENST00000461446 RAVER2Q9HCJ3 691 aaKnown RBP11.86□□□□□ -0.51
SYN3-206ENST00000461446 FEM1BQ9UK73 627 aa11.86□□□□□ -0.51
SYN3-206ENST00000461446 TMEM232C9JQI7 657 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 H0YGN5 161 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 MNX1P50219 401 aaPredicted RBP11.85□□□□□ -0.51
SYN3-206ENST00000461446 SNAP25P60880 206 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 FGD1P98174 961 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 TROAPQ12815 778 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 PRAMEF19Q5SWL8 479 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 LHX8Q68G74 356 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 SNRNP48Q6IEG0 339 aaKnown RBP11.85□□□□□ -0.51
SYN3-206ENST00000461446 NFXL1Q6ZNB6 911 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 Q6ZUG5 572 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 CATIPQ7Z7H3 387 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 SGMS1Q86VZ5 419 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 ABRAQ8N0Z2 381 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 TEX13BQ9BXU2 312 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 AGXT2Q9BYV1 514 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 OGDHLQ9ULD0 1010 aa11.85□□□□□ -0.51
SYN3-206ENST00000461446 ZNFX1Q9P2E3 1918 aaKnown RBP11.84□□□□□ -0.51
SYN3-206ENST00000461446 CCDC69A6NI79 296 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 PLA2G6O60733 806 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 ZBED4O75132 1171 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 CNGA1P29973 690 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 KCTD2Q14681 263 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 CCDC96Q2M329 555 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 GPATCH4Q5T3I0 446 aaKnown RBP11.84□□□□□ -0.51
SYN3-206ENST00000461446 OLFML2BQ68BL8 750 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 ZNF654Q8IZM8 581 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 CHURC1Q8WUH1 139 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 MAML3Q96JK9 1138 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 TBC1D32Q96NH3 1257 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 KIF2CQ99661 725 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 SLC38A10Q9HBR0 1119 aa11.84□□□□□ -0.51
SYN3-206ENST00000461446 CTDP1Q9Y5B0 961 aaPredicted RBP11.84□□□□□ -0.51
SYN3-206ENST00000461446 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
SYN3-206ENST00000461446 CEP290O15078 2479 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 DDAH1O94760 285 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 PARP1P09874 1014 aaKnown RBP11.83□□□□□ -0.52
SYN3-206ENST00000461446 CALM1P0DP23 149 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 CALM2P0DP24 149 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 CALM3P0DP25 149 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 CYBAP13498 195 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 STAT2P52630 851 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 IKQ13123 557 aaPredicted RBP11.83□□□□□ -0.52
SYN3-206ENST00000461446 ZNF792Q3KQV3 632 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 ASPRV1Q53RT3 343 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 ANO1Q5XXA6 986 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 TTBK2Q6IQ55 1244 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 BTNL9Q6UXG8 535 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 NECAB2Q7Z6G3 386 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 FAM160B2Q86V87 743 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 BRF1Q92994 677 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 MAP3K14Q99558 947 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 ALDH8A1Q9H2A2 487 aaPredicted RBP11.83□□□□□ -0.52
SYN3-206ENST00000461446 GPCPD1Q9NPB8 672 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 PDRG1Q9NUG6 133 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 BRPF3Q9ULD4 1205 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 SLC12A7Q9Y666 1083 aa11.83□□□□□ -0.52
SYN3-206ENST00000461446 ZNF236Q9UL36 1845 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms