RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 CABYRO75952 493 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 KCNQ1P51787 676 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 RABGGTBP53611 331 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 NOL8Q76FK4 1167 aaKnown RBP20.68■□□□□ 0.9
TOP3A-202ENST00000461127 CPXCR1Q8N123 301 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 PRPF38AQ8NAV1 312 aaKnown RBP20.68■□□□□ 0.9
TOP3A-202ENST00000461127 DNAJC2Q99543 621 aaKnown RBP20.68■□□□□ 0.9
TOP3A-202ENST00000461127 LRFN3Q9BTN0 628 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 SEZ6LQ9BYH1 1024 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 FBXO40Q9UH90 709 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 RIPK3Q9Y572 518 aa20.68■□□□□ 0.9
TOP3A-202ENST00000461127 BAZ2AQ9UIF9 1905 aaKnown RBP20.68■□□□□ 0.9
TOP3A-202ENST00000461127 MCM3APO60318 1980 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 USP17L12C9JPN9 530 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 USP17L21D6R901 530 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 ATP2A1O14983 1001 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 MBD4O95243 580 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 ARMCX2Q7L311 632 aa20.67■□□□□ 0.9
TOP3A-202ENST00000461127 CYP2D7A0A087X1C5 515 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 ZBBXA8MT70 800 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 PRKAB2O43741 272 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 CCL23P55773 120 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 HSP90AB4PQ58FF6 505 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 TMEM31Q5JXX7 168 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.66■□□□□ 0.9
TOP3A-202ENST00000461127 FTSJ3Q8IY81 847 aaKnown RBP20.66■□□□□ 0.9
TOP3A-202ENST00000461127 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.66■□□□□ 0.9
TOP3A-202ENST00000461127 COG5Q9UP83 839 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
TOP3A-202ENST00000461127 PRRC2BQ5JSZ5 2229 aaKnown RBP20.65■□□□□ 0.9
TOP3A-202ENST00000461127 UMODL1Q5DID0 1318 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 ZEB2O60315 1214 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 ATP2A2P16615 1042 aaKnown RBP20.65■□□□□ 0.9
TOP3A-202ENST00000461127 NKX3-2P78367 333 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 BEX3Q00994 111 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 TNFAIP2Q03169 654 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 ITGA7Q13683 1181 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 CXCL17Q6UXB2 119 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 SLC43A3Q8NBI5 491 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 NUP88Q99567 741 aaPredicted RBP20.65■□□□□ 0.9
TOP3A-202ENST00000461127 NOC4LQ9BVI4 516 aaKnown RBP20.65■□□□□ 0.9
TOP3A-202ENST00000461127 EPHX3Q9H6B9 360 aa20.65■□□□□ 0.9
TOP3A-202ENST00000461127 REV3LO60673 3130 aa20.64■□□□□ 0.9
TOP3A-202ENST00000461127 CTAGE5O15320 804 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 MYOGP15173 224 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 TMEM67Q5HYA8 995 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 ITPRIPQ8IWB1 547 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 CCDC144CPQ8IYA2 1237 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 CHST13Q8NET6 341 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.89
TOP3A-202ENST00000461127 AP5M1Q9H0R1 490 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 IL1RAPL2Q9NP60 686 aa20.64■□□□□ 0.89
TOP3A-202ENST00000461127 F5H6K3 240 aa20.63■□□□□ 0.89
TOP3A-202ENST00000461127 POU3F3P20264 500 aaPredicted RBP20.63■□□□□ 0.89
TOP3A-202ENST00000461127 KLRC3Q07444 240 aa20.63■□□□□ 0.89
TOP3A-202ENST00000461127 FSCN1Q16658 493 aaKnown RBP20.63■□□□□ 0.89
TOP3A-202ENST00000461127 RAVER2Q9HCJ3 691 aaKnown RBP20.63■□□□□ 0.89
TOP3A-202ENST00000461127 MTCH2Q9Y6C9 303 aa20.63■□□□□ 0.89
TOP3A-202ENST00000461127 PIEZO1Q92508 2521 aa20.63■□□□□ 0.89
TOP3A-202ENST00000461127 TRANK1O15050 2925 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 SMIM22K7EJ46 135 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 PFKMP08237 780 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 ADD2P35612 726 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 TLK2Q86UE8 772 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 CLASRPQ8N2M8 674 aaKnown RBP20.62■□□□□ 0.89
TOP3A-202ENST00000461127 KIFC2Q96AC6 838 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 FGD4Q96M96 766 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 TRPV6Q9H1D0 765 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 WNT8AQ9H1J5 351 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 NYAP2Q9P242 653 aa20.62■□□□□ 0.89
TOP3A-202ENST00000461127 B4GALT4O60513 344 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 NDUFB10O96000 172 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 IFIT2P09913 472 aaKnown RBP20.61■□□□□ 0.89
TOP3A-202ENST00000461127 OAZ1P54368 228 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 CEP85Q6P2H3 762 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 RHPN1Q8TCX5 695 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 KATNBL1Q9H079 304 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 SLC38A10Q9HBR0 1119 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 PAG1Q9NWQ8 432 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 SLC4A4Q9Y6R1 1079 aa20.61■□□□□ 0.89
TOP3A-202ENST00000461127 ASB14A6NK59 587 aa20.6■□□□□ 0.89
TOP3A-202ENST00000461127 CA3P07451 260 aa20.6■□□□□ 0.89
TOP3A-202ENST00000461127 CTR9Q6PD62 1173 aa20.6■□□□□ 0.89
TOP3A-202ENST00000461127 HLA-CQ95604 372 aa20.6■□□□□ 0.89
TOP3A-202ENST00000461127 ARPP21Q9UBL0 812 aaPredicted RBP20.6■□□□□ 0.89
TOP3A-202ENST00000461127 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.59■□□□□ 0.89
TOP3A-202ENST00000461127 ACTN1P12814 892 aa20.59■□□□□ 0.89
TOP3A-202ENST00000461127 SCLYQ96I15 445 aa20.59■□□□□ 0.89
TOP3A-202ENST00000461127 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.59■□□□□ 0.89
TOP3A-202ENST00000461127 MKNK2Q9HBH9 465 aa20.59■□□□□ 0.89
TOP3A-202ENST00000461127 HOMER2Q9NSB8 354 aa20.59■□□□□ 0.89
TOP3A-202ENST00000461127 FEM1BQ9UK73 627 aa20.59■□□□□ 0.89
TOP3A-202ENST00000461127 GNEQ9Y223 722 aaKnown RBP20.59■□□□□ 0.89
TOP3A-202ENST00000461127 ASTN1O14525 1302 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 RFXAPO00287 272 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 DYNC1LI2O43237 492 aaPredicted RBP20.58■□□□□ 0.89
TOP3A-202ENST00000461127 TLL1O43897 1013 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 GPR37L1O60883 481 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 SUPT20HL2P0C7V6 817 aa20.58■□□□□ 0.89
TOP3A-202ENST00000461127 FDX1P10109 184 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms