RNA–Protein interactions for RNA: ENST00000461120.1

CHRD-209, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 683 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-209ENST00000461120 ADAMTS5Q9UNA0 930 aa16.06■□□□□ 0.16
CHRD-209ENST00000461120 SPTBN5Q9NRC6 3674 aaKnown RBP16.05■□□□□ 0.16
CHRD-209ENST00000461120 GOLGA8AA7E2F4 631 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 GOLGA8BA8MQT2 603 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 KLRF2D3W0D1 207 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 BCRP11274 1271 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 KIF5BP33176 963 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 SYDE2Q5VT97 1194 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 C17orf99Q6UX52 265 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 Q7L0L9 218 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 CCDC144CPQ8IYA2 1237 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 FANCBQ8NB91 859 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 SYMPKQ92797 1274 aaKnown RBP16.05■□□□□ 0.16
CHRD-209ENST00000461120 UBA5Q9GZZ9 404 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 RBPJLQ9UBG7 517 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 CPA4Q9UI42 421 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 PRR12Q9ULL5 1215 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 A0A0G2JMZ2 1700 aa16.05■□□□□ 0.16
CHRD-209ENST00000461120 NID2Q14112 1375 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 VWA5AO00534 786 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 PEX10O60683 326 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 CNMDO75829 334 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 PDIA3P30101 505 aaKnown RBP16.04■□□□□ 0.16
CHRD-209ENST00000461120 METAP2P50579 478 aaKnown RBP eCLIP16.04■□□□□ 0.16
CHRD-209ENST00000461120 ANKRD13CQ8N6S4 541 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 MB21D1Q8N884 522 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 ZNF274Q96GC6 653 aaPredicted RBP16.04■□□□□ 0.16
CHRD-209ENST00000461120 PAGR1Q9BTK6 254 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 TXNRD2Q9NNW7 524 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 MORF4L1Q9UBU8 362 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 TPCN1Q9ULQ1 816 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 RABGAP1Q9Y3P9 1069 aa16.04■□□□□ 0.16
CHRD-209ENST00000461120 ZBED4O75132 1171 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 PLEKHA8P1O95397 391 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 FDX1P10109 184 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 GNAQP50148 359 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 RTN1Q16799 776 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 SLC35G1Q2M3R5 365 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 NOL8Q76FK4 1167 aaKnown RBP16.03■□□□□ 0.16
CHRD-209ENST00000461120 IL27Q8NEV9 243 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 SLC38A10Q9HBR0 1119 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 FAM217BQ9NTX9 383 aaPredicted RBP16.03■□□□□ 0.16
CHRD-209ENST00000461120 RBM28Q9NW13 759 aaKnown RBP16.03■□□□□ 0.16
CHRD-209ENST00000461120 BTBD7Q9P203 1132 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 PTCH2Q9Y6C5 1203 aa16.03■□□□□ 0.16
CHRD-209ENST00000461120 EVI5O60447 810 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 CDC27P30260 824 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 SNAP25P60880 206 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 PPP2R5BQ15173 497 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 FAM110CQ1W6H9 321 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 TMTC3Q6ZXV5 915 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 ADGRF4Q8IZF3 695 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 LZTS2Q9BRK4 669 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 RANBP17Q9H2T7 1088 aaKnown RBP16.02■□□□□ 0.16
CHRD-209ENST00000461120 RIOX1Q9H6W3 641 aa16.02■□□□□ 0.16
CHRD-209ENST00000461120 COL11A1P12107 1806 aaPredicted RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 DHX16O60231 1041 aaKnown RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 ST18O60284 1047 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 SMARCA1P28370 1054 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 ERVK-9P63128 1117 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 ERVK-24P63145 666 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 TMEM132BQ14DG7 1078 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 Q3C1V9 767 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 SRBD1Q8N5C6 995 aaKnown RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 GPRC5AQ8NFJ5 357 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 SPZ1Q9BXG8 430 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 JMJD4Q9H9V9 463 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 VAT1LQ9HCJ6 419 aa16.01■□□□□ 0.15
CHRD-209ENST00000461120 ZNF214Q9UL59 606 aaPredicted RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 CTDP1Q9Y5B0 961 aaPredicted RBP16.01■□□□□ 0.15
CHRD-209ENST00000461120 RPTORQ8N122 1335 aa16■□□□□ 0.15
CHRD-209ENST00000461120 CCDC196A0A1B0GTZ2 297 aa16■□□□□ 0.15
CHRD-209ENST00000461120 ATP2A1O14983 1001 aa16■□□□□ 0.15
CHRD-209ENST00000461120 CYTH3O43739 400 aa16■□□□□ 0.15
CHRD-209ENST00000461120 PFKFB2O60825 505 aa16■□□□□ 0.15
CHRD-209ENST00000461120 LARGE1O95461 756 aa16■□□□□ 0.15
CHRD-209ENST00000461120 ADD1P35611 737 aaKnown RBP16■□□□□ 0.15
CHRD-209ENST00000461120 OAZ1P54368 228 aa16■□□□□ 0.15
CHRD-209ENST00000461120 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
CHRD-209ENST00000461120 STK3Q13188 491 aa16■□□□□ 0.15
CHRD-209ENST00000461120 ME3Q16798 604 aa16■□□□□ 0.15
CHRD-209ENST00000461120 MTMR8Q96EF0 704 aa16■□□□□ 0.15
CHRD-209ENST00000461120 SPATC1LQ9H0A9 340 aa16■□□□□ 0.15
CHRD-209ENST00000461120 NCOA5Q9HCD5 579 aaKnown RBP16■□□□□ 0.15
CHRD-209ENST00000461120 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
CHRD-209ENST00000461120 LIMCH1Q9UPQ0 1083 aa16■□□□□ 0.15
CHRD-209ENST00000461120 ZNF536O15090 1300 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
CHRD-209ENST00000461120 STAT3P40763 770 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 CCNA1P78396 465 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 FUT2Q10981 343 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 PLS1Q14651 629 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 CDC37Q16543 378 aaPredicted RBP15.99■□□□□ 0.15
CHRD-209ENST00000461120 CCDC174Q6PII3 467 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 CPXCR1Q8N123 301 aa15.99■□□□□ 0.15
CHRD-209ENST00000461120 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
CHRD-209ENST00000461120 SLKQ9H2G2 1235 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms