RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 FZD6O60353 706 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 STARD3NLO95772 234 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 EPHA1P21709 976 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 SSTR4P31391 388 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 IL6STP40189 918 aaPredicted RBP5.9□□□□□ -1.46
CNN3-204ENST00000461018 USP5P45974 858 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 PTPN12Q05209 780 aaKnown RBP5.9□□□□□ -1.46
CNN3-204ENST00000461018 AMOTQ4VCS5 1084 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 XKR5Q6UX68 686 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 TPTE2Q6XPS3 522 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 UBE2Q1Q7Z7E8 422 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 MAP4K3Q8IVH8 894 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 CACTIN-AS1Q8N1I8 211 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 GALNT11Q8NCW6 608 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 SLC7A3Q8WY07 619 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 SNX27Q96L92 541 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 HHIPQ96QV1 700 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.46
CNN3-204ENST00000461018 BRPF3Q9ULD4 1205 aa5.9□□□□□ -1.46
CNN3-204ENST00000461018 NIP7Q9Y221 180 aaKnown RBP eCLIP5.9□□□□□ -1.46
CNN3-204ENST00000461018 PRUNE2Q8WUY3 3088 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 PDE2AO00408 941 aaPredicted RBP5.89□□□□□ -1.47
CNN3-204ENST00000461018 ICMTO60725 284 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 POLR3DP05423 398 aaPredicted RBP5.89□□□□□ -1.47
CNN3-204ENST00000461018 GLB1P16278 677 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 NPR3P17342 541 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 HOXA10P31260 410 aaPredicted RBP5.89□□□□□ -1.47
CNN3-204ENST00000461018 CD97P48960 835 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 EHHADHQ08426 723 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 FZD5Q13467 585 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 PRKG1Q13976 671 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 TNIP1Q15025 636 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 ANGEL2Q5VTE6 544 aaKnown RBP5.89□□□□□ -1.47
CNN3-204ENST00000461018 ASAP3Q8TDY4 903 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 PMEPA1Q969W9 287 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 MEGF10Q96KG7 1140 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 FAM161BQ96MY7 647 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 OSMRQ99650 979 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 CHRDQ9H2X0 955 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 DZANK1Q9NVP4 752 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 USP16Q9Y5T5 823 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 ZSWIM8A7E2V4 1837 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 KIF20BQ96Q89 1820 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 ZNF609O15014 1411 aa5.89□□□□□ -1.47
CNN3-204ENST00000461018 FSCN2O14926 492 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 DDX3YO15523 660 aaKnown RBP5.88□□□□□ -1.47
CNN3-204ENST00000461018 TAL1P17542 331 aaPredicted RBP5.88□□□□□ -1.47
CNN3-204ENST00000461018 FSTP19883 344 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 CD68P34810 354 aaPredicted RBP5.88□□□□□ -1.47
CNN3-204ENST00000461018 KIAA2012Q0VF49 1180 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 CRHR2Q13324 411 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 KIF4BQ2VIQ3 1234 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 SLC9C1Q4G0N8 1177 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 ACAD11Q709F0 780 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 SNX29Q8TEQ0 813 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 DPF2Q92785 391 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 RTFDC1Q9BY42 306 aaPredicted RBP5.88□□□□□ -1.47
CNN3-204ENST00000461018 ARHGAP39Q9C0H5 1083 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 DBNDD1Q9H9R9 158 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 SRA1Q9HD15 236 aaKnown RBP5.88□□□□□ -1.47
CNN3-204ENST00000461018 RNF114Q9Y508 228 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 CDHR2Q9BYE9 1310 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 RTL9Q8NET4 1388 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 KDM3BQ7LBC6 1761 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 UBR2Q8IWV8 1755 aa5.88□□□□□ -1.47
CNN3-204ENST00000461018 CACNA1AO00555 2505 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 TMEM265A0A087WTH1 108 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 A0A1W2PPC1 479 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 F8W735 103 aaPredicted RBP5.87□□□□□ -1.47
CNN3-204ENST00000461018 EDN3P14138 238 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 MAP3K12Q12852 859 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 DUOXA2Q1HG44 320 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 SULT6B1Q6IMI4 303 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 ERO1AQ96HE7 468 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 CRAMP1Q96RY5 1269 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 PTPN18Q99952 460 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 GDF15Q99988 308 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 ZKSCAN3Q9BRR0 538 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 SEC31BQ9NQW1 1179 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 KCNK4Q9NYG8 393 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 ATP6V0A2Q9Y487 856 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 RPTORQ8N122 1335 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 HEG1Q9ULI3 1381 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 ALPK3Q96L96 1907 aa5.87□□□□□ -1.47
CNN3-204ENST00000461018 TAF1P21675 1872 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 WISP1O95388 367 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 NLRP12P59046 1061 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 FKBP1BP68106 108 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 SP3Q02447 781 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 SREBF2Q12772 1141 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 CLEC4GQ6UXB4 293 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 KLHL23Q8NBE8 558 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 RPGRQ92834 1020 aaKnown RBP5.86□□□□□ -1.47
CNN3-204ENST00000461018 KLHDC7BQ96G42 594 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 RBM17Q96I25 401 aaKnown RBP5.86□□□□□ -1.47
CNN3-204ENST00000461018 CLMNQ96JQ2 1002 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 ADAM19Q9H013 955 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 LATS2Q9NRM7 1088 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 EGFL7Q9UHF1 273 aa5.86□□□□□ -1.47
CNN3-204ENST00000461018 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms