RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 PPP1R3GB7ZBB8 358 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 UQCRHP07919 91 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 SLURP2P0DP57 97 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 ORC2Q13416 577 aaPredicted RBP15.77■□□□□ 0.12
PTPRN-210ENST00000460801 KARSQ15046 597 aaKnown RBP15.77■□□□□ 0.12
PTPRN-210ENST00000460801 GPATCH4Q5T3I0 446 aaKnown RBP15.77■□□□□ 0.12
PTPRN-210ENST00000460801 NEK8Q86SG6 692 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 REXO1Q8N1G1 1221 aaKnown RBP15.77■□□□□ 0.12
PTPRN-210ENST00000460801 JMJD4Q9H9V9 463 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 INTS13Q9NVM9 706 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 PI4KBQ9UBF8 816 aa15.77■□□□□ 0.12
PTPRN-210ENST00000460801 SFPQP23246 707 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTPRN-210ENST00000460801 RBM5P52756 815 aaKnown RBP eCLIP15.76■□□□□ 0.11
PTPRN-210ENST00000460801 TCP10Q12799 353 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 SPATA1Q5VX52 437 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 SH3BP5LQ7L8J4 393 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 ADGRF4Q8IZF3 695 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 MYRIPQ8NFW9 859 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 PNMA6FA0A0J9YX94 578 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 MPHOSPH10O00566 681 aaKnown RBP15.76■□□□□ 0.11
PTPRN-210ENST00000460801 OR52Z1P0C646 297 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 STAT6P42226 847 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 LETM2Q2VYF4 491 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 NAALADL2Q58DX5 795 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 SUPT20HQ8NEM7 779 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 TBCKQ8TEA7 893 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 COA7Q96BR5 231 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 BLZF1Q9H2G9 400 aa15.76■□□□□ 0.11
PTPRN-210ENST00000460801 SAMSN1Q9NSI8 373 aaKnown RBP15.76■□□□□ 0.11
PTPRN-210ENST00000460801 BIN2Q9UBW5 565 aaPredicted RBP15.76■□□□□ 0.11
PTPRN-210ENST00000460801 TMEM232C9JQI7 657 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 CCNT1O60563 726 aaKnown RBP15.75■□□□□ 0.11
PTPRN-210ENST00000460801 PPP1R18Q6NYC8 613 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 MKL1Q969V6 931 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 AK8Q96MA6 479 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 PP2D1A8MPX8 630 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 CDK11BP21127 795 aaKnown RBP15.75■□□□□ 0.11
PTPRN-210ENST00000460801 UBA7P41226 1012 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 KCNJ6P48051 423 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 ADCY7P51828 1080 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 HSP90AA4PQ58FG1 418 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 JAKMIP3Q5VZ66 844 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 TTBK2Q6IQ55 1244 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 TATDN1Q6P1N9 297 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 POTEAQ6S8J7 498 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 SMYD4Q8IYR2 804 aaPredicted RBP15.75■□□□□ 0.11
PTPRN-210ENST00000460801 MTMR8Q96EF0 704 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 TMEM260Q9NX78 707 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 NYAP2Q9P242 653 aa15.75■□□□□ 0.11
PTPRN-210ENST00000460801 SYNRGQ9UMZ2 1314 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 TPD52L1Q16890 204 aaPredicted RBP15.74■□□□□ 0.11
PTPRN-210ENST00000460801 CERKLQ49MI3 558 aaPredicted RBP15.74■□□□□ 0.11
PTPRN-210ENST00000460801 RRAGBQ5VZM2 374 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 C16orf45Q96MC5 204 aaPredicted RBP15.74■□□□□ 0.11
PTPRN-210ENST00000460801 FAM196BA6NMK8 535 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 USP27XA6NNY8 438 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 YDJCA8MPS7 323 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 PPP1R11O60927 126 aaPredicted RBP15.74■□□□□ 0.11
PTPRN-210ENST00000460801 ATP2B2Q01814 1243 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 CDKAL1Q5VV42 579 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 KLHL10Q6JEL2 608 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 CCAR2Q8N163 923 aaKnown RBP15.74■□□□□ 0.11
PTPRN-210ENST00000460801 KANSL2Q9H9L4 492 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 RIC8AQ9NPQ8 531 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 RMND1Q9NWS8 449 aa15.74■□□□□ 0.11
PTPRN-210ENST00000460801 RPN1P04843 607 aaKnown RBP15.73■□□□□ 0.11
PTPRN-210ENST00000460801 MYL1P05976 194 aa15.73■□□□□ 0.11
PTPRN-210ENST00000460801 TBX2Q13207 712 aaPredicted RBP15.73■□□□□ 0.11
PTPRN-210ENST00000460801 ZNF658Q5TYW1 1059 aaPredicted RBP15.73■□□□□ 0.11
PTPRN-210ENST00000460801 APTXQ7Z2E3 356 aaKnown RBP15.73■□□□□ 0.11
PTPRN-210ENST00000460801 ZSCAN29Q8IWY8 852 aaPredicted RBP15.73■□□□□ 0.11
PTPRN-210ENST00000460801 KBTBD4Q9NVX7 518 aa15.73■□□□□ 0.11
PTPRN-210ENST00000460801 A0A1B0GTH6 734 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 ZBTB5O15062 677 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 C21orf2O43822 256 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 EDIL3O43854 480 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 ENTPD3O75355 529 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
PTPRN-210ENST00000460801 TNNT1P13805 278 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 GTF2F1P35269 517 aaKnown RBP eCLIP15.72■□□□□ 0.11
PTPRN-210ENST00000460801 SLC16A2P36021 539 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 STX17P56962 302 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 NR1I3Q14994 352 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 CCDC96Q2M329 555 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 GRIPAP1Q4V328 841 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 KCTD1Q719H9 257 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 TMX1Q9H3N1 280 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 CUEDC2Q9H467 287 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 TDRD3Q9H7E2 651 aaKnown RBP15.72■□□□□ 0.11
PTPRN-210ENST00000460801 ATRNL1Q5VV63 1379 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 PSME4Q14997 1843 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 USP17L10C9JJH3 530 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 DYNC1I1O14576 645 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 NRDCO43847 1150 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 CLK2P49760 499 aaKnown RBP15.72■□□□□ 0.11
PTPRN-210ENST00000460801 SHROOM1Q2M3G4 852 aaPredicted RBP15.72■□□□□ 0.11
PTPRN-210ENST00000460801 NYAP1Q6ZVC0 841 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 CABP7Q86V35 215 aa15.72■□□□□ 0.11
PTPRN-210ENST00000460801 SIAH1Q8IUQ4 282 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms