RNA–Protein interactions for RNA: ENST00000460509.1

VBP1-202, Transcript of VHL binding protein 1, humanhuman

TSL 2

Gene VBP1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-202ENST00000460509 GTF2IRD2Q86UP8 949 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 LINC00116Q8NCU8 138 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 SGSM3Q96HU1 749 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 MRGPRX3Q96LB0 322 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 CDC6Q99741 560 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 PRDM7Q9NQW5 492 aa7.04□□□□□ -1.28
VBP1-202ENST00000460509 KIAA1324LA8MWY0 1029 aaPredicted RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 WNT11O96014 354 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 SNRPB2P08579 225 aaKnown RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 FAM153BP0C7A2 387 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 IFNGR1P15260 489 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 SPINK2P20155 84 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 ECI1P42126 302 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 GRIA2P42262 883 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 GRB10Q13322 594 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 ZPBP2Q6X784 338 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 RNF111Q6ZNA4 994 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 NAT16Q8N8M0 369 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 SH3TC2Q8TF17 1288 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 ZNF669Q96BR6 464 aaPredicted RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 FCRL3Q96P31 734 aaPredicted RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 IPO9Q96P70 1041 aaKnown RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 AARSD1Q9BTE6 412 aaKnown RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 AP5S1Q9NUS5 200 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 SLAMF8Q9P0V8 285 aa7.03□□□□□ -1.28
VBP1-202ENST00000460509 MRPL42Q9Y6G3 142 aaKnown RBP7.03□□□□□ -1.28
VBP1-202ENST00000460509 TRAV20A0A0B4J274 112 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 PRODHO43272 600 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 HYAL3O43820 417 aaPredicted RBP7.02□□□□□ -1.29
VBP1-202ENST00000460509 PRNPP04156 253 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 SEPHS1P49903 392 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 SCRN1Q12765 414 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 LRP8Q14114 963 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 PLCL1Q15111 1095 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 YOD1Q5VVQ6 348 aaPredicted RBP7.02□□□□□ -1.29
VBP1-202ENST00000460509 NBPF11Q86T75 865 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 MCMBPQ9BTE3 642 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 IER2Q9BTL4 223 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 SLC12A9Q9BXP2 914 aa7.02□□□□□ -1.29
VBP1-202ENST00000460509 TMA7Q9Y2S6 64 aaKnown RBP7.02□□□□□ -1.29
VBP1-202ENST00000460509 C2orf71A6NGG8 1288 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 SMARCA5O60264 1052 aaPredicted RBP7.01□□□□□ -1.29
VBP1-202ENST00000460509 ZNF205O95201 554 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 TEKQ02763 1124 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 SF1Q15637 639 aaKnown RBP7.01□□□□□ -1.29
VBP1-202ENST00000460509 JAZF1Q86VZ6 243 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 ZBTB38Q8NAP3 1195 aaPredicted RBP7.01□□□□□ -1.29
VBP1-202ENST00000460509 PI4K2BQ8TCG2 481 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 THAP3Q8WTV1 239 aaPredicted RBP7.01□□□□□ -1.29
VBP1-202ENST00000460509 NKX2-4Q9H2Z4 354 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 KANSL2Q9H9L4 492 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 ARHGEF4Q9NR80 690 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 LMCD1Q9NZU5 365 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 BACE2Q9Y5Z0 518 aa7.01□□□□□ -1.29
VBP1-202ENST00000460509 TLDC2A0PJX2 215 aa7□□□□□ -1.29
VBP1-202ENST00000460509 AURKAO14965 403 aa7□□□□□ -1.29
VBP1-202ENST00000460509 ADAMTS4O75173 837 aa7□□□□□ -1.29
VBP1-202ENST00000460509 HOXC12P31275 282 aa7□□□□□ -1.29
VBP1-202ENST00000460509 L1CAMP32004 1257 aa7□□□□□ -1.29
VBP1-202ENST00000460509 C2orf27AQ580R0 203 aa7□□□□□ -1.29
VBP1-202ENST00000460509 NSMFQ6X4W1 530 aa7□□□□□ -1.29
VBP1-202ENST00000460509 KSR1Q8IVT5 923 aa7□□□□□ -1.29
VBP1-202ENST00000460509 RNPC3Q96LT9 517 aaKnown RBP7□□□□□ -1.29
VBP1-202ENST00000460509 KRTAP9-9Q9BYP9 154 aa7□□□□□ -1.29
VBP1-202ENST00000460509 KRTAP9-4Q9BYQ2 154 aa7□□□□□ -1.29
VBP1-202ENST00000460509 ADAMTS10Q9H324 1103 aa7□□□□□ -1.29
VBP1-202ENST00000460509 GPRC5CQ9NQ84 441 aa7□□□□□ -1.29
VBP1-202ENST00000460509 PAK6Q9NQU5 681 aaPredicted RBP7□□□□□ -1.29
VBP1-202ENST00000460509 CYP26B1Q9NR63 512 aa7□□□□□ -1.29
VBP1-202ENST00000460509 DNAJC25-GNG10A0A024R161 153 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 ADCY3O60266 1144 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 HK2P52789 917 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 PRSS53Q2L4Q9 553 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 RALGPS1Q5JS13 557 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 FAM209AQ5JX71 171 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 RTP2Q5QGT7 225 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 KRTAP4-12Q9BQ66 201 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 PTCH2Q9Y6C5 1203 aa6.99□□□□□ -1.29
VBP1-202ENST00000460509 LOC105371045A0A1W2PR82 267 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 ESYT3A0FGR9 886 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 TMEM82A0PJX8 343 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 PABPC1P11940 636 aaKnown RBP6.98□□□□□ -1.29
VBP1-202ENST00000460509 ENDOUP21128 410 aaKnown RBP6.98□□□□□ -1.29
VBP1-202ENST00000460509 FUT4P22083 530 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 FOXB2Q5VYV0 432 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 WFDC3Q8IUB2 231 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 AGBL5Q8NDL9 886 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 ZSWIM2Q8NEG5 633 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 KCTD13Q8WZ19 329 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 CCDC140Q96MF4 163 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 FANCLQ9NW38 375 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 CLEC1BQ9P126 229 aa6.98□□□□□ -1.29
VBP1-202ENST00000460509 TRBV23-1A0A0A0MS06 115 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 CPP00450 1065 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 THBDP07204 575 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 FGFR1P11362 822 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 GFRA1P56159 465 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 LAPTM5Q13571 262 aa6.97□□□□□ -1.29
VBP1-202ENST00000460509 EEF1DP3Q658K8 133 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms