RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 AMPD2Q01433 879 aa9.48□□□□□ -0.89
CKAP2-204ENST00000459902 DPY19L1Q2PZI1 675 aa9.48□□□□□ -0.89
CKAP2-204ENST00000459902 RALGPS1Q5JS13 557 aa9.48□□□□□ -0.89
CKAP2-204ENST00000459902 CRACR2BQ8N4Y2 399 aaPredicted RBP9.48□□□□□ -0.89
CKAP2-204ENST00000459902 SGSM3Q96HU1 749 aa9.48□□□□□ -0.89
CKAP2-204ENST00000459902 ALPK1Q96QP1 1244 aa9.48□□□□□ -0.89
CKAP2-204ENST00000459902 GPR55Q9Y2T6 319 aaPredicted RBP9.48□□□□□ -0.89
CKAP2-204ENST00000459902 AGRPO00253 132 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 DIAPH1O60610 1272 aaKnown RBP9.47□□□□□ -0.89
CKAP2-204ENST00000459902 CAPNS1P04632 268 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
CKAP2-204ENST00000459902 GSTM1P09488 218 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 IFNGR1P15260 489 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 IFRD2Q12894 506 aaPredicted RBP9.47□□□□□ -0.89
CKAP2-204ENST00000459902 GTF2IRD2BQ6EKJ0 949 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 WAPLQ7Z5K2 1190 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 GTF2IRD2Q86UP8 949 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 ABI1Q8IZP0 508 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 Q8N3U1 123 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 AP5S1Q9NUS5 200 aa9.47□□□□□ -0.89
CKAP2-204ENST00000459902 IQCA1LA6NCM1 817 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 PPP2R2AP63151 447 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 SSRP1Q08945 709 aaKnown RBP9.46□□□□□ -0.9
CKAP2-204ENST00000459902 ZNF792Q3KQV3 632 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 BTN2A2Q8WVV5 523 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 MRFAP1L1Q96HT8 127 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 SPATA9Q9BWV2 254 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 CDADC1Q9BWV3 514 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 EBF1Q9UH73 591 aa9.46□□□□□ -0.9
CKAP2-204ENST00000459902 OAS3Q9Y6K5 1087 aaKnown RBP9.46□□□□□ -0.9
CKAP2-204ENST00000459902 STXBP3O00186 592 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 AURKAO14965 403 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 ZGLP1P0C6A0 271 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 GRIA2P42262 883 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 LRRC47Q8N1G4 583 aaKnown RBP9.45□□□□□ -0.9
CKAP2-204ENST00000459902 NKX2-4Q9H2Z4 354 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 TMEM59LQ9UK28 342 aa9.45□□□□□ -0.9
CKAP2-204ENST00000459902 G6PC3Q9BUM1 346 aa9.44□□□□□ -0.9
CKAP2-204ENST00000459902 CYP26B1Q9NR63 512 aa9.44□□□□□ -0.9
CKAP2-204ENST00000459902 C19orf73Q9NVV2 129 aa9.44□□□□□ -0.9
CKAP2-204ENST00000459902 KDM2BQ8NHM5 1336 aa9.44□□□□□ -0.9
CKAP2-204ENST00000459902 C2orf71A6NGG8 1288 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 ADCY3O60266 1144 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 CYP4F3Q08477 520 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 HSP90AA2PQ14568 343 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-204ENST00000459902 SF1Q15637 639 aaKnown RBP9.43□□□□□ -0.9
CKAP2-204ENST00000459902 NBPF11Q86T75 865 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 LINC01599Q8WXQ3 324 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 SYTL4Q96C24 671 aaPredicted RBP9.43□□□□□ -0.9
CKAP2-204ENST00000459902 ARHGEF4Q9NR80 690 aa9.43□□□□□ -0.9
CKAP2-204ENST00000459902 ENDOUP21128 410 aaKnown RBP9.42□□□□□ -0.9
CKAP2-204ENST00000459902 HK2P52789 917 aa9.42□□□□□ -0.9
CKAP2-204ENST00000459902 SCRN1Q12765 414 aa9.42□□□□□ -0.9
CKAP2-204ENST00000459902 TMEM52Q8NDY8 209 aa9.42□□□□□ -0.9
CKAP2-204ENST00000459902 ERVK13-1Q9NX77 482 aa9.42□□□□□ -0.9
CKAP2-204ENST00000459902 BACE2Q9Y5Z0 518 aa9.42□□□□□ -0.9
CKAP2-204ENST00000459902 FGF10O15520 208 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 FAM153BP0C7A2 387 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 HOXC12P31275 282 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 CEBPAP49715 358 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 RCSD1Q6JBY9 416 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 COPS5Q92905 334 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 CCDC120Q96HB5 630 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 MAP6Q96JE9 813 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 FCRL2Q96LA5 508 aaPredicted RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 AARSD1Q9BTE6 412 aaKnown RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 RC3H2Q9HBD1 1191 aaKnown RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 CWC22Q9HCG8 908 aaKnown RBP9.41□□□□□ -0.9
CKAP2-204ENST00000459902 GPRC5CQ9NQ84 441 aa9.41□□□□□ -0.9
CKAP2-204ENST00000459902 GDNFP39905 211 aa9.4□□□□□ -0.9
CKAP2-204ENST00000459902 SEPHS1P49903 392 aa9.4□□□□□ -0.9
CKAP2-204ENST00000459902 DUSP4Q13115 394 aa9.4□□□□□ -0.9
CKAP2-204ENST00000459902 YOD1Q5VVQ6 348 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-204ENST00000459902 EEF1DP3Q658K8 133 aa9.4□□□□□ -0.9
CKAP2-204ENST00000459902 JMYQ8N9B5 988 aa9.4□□□□□ -0.9
CKAP2-204ENST00000459902 ZBTB38Q8NAP3 1195 aaPredicted RBP9.4□□□□□ -0.9
CKAP2-204ENST00000459902 TRAV20A0A0B4J274 112 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 SCG5P05408 212 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 SNRPB2P08579 225 aaKnown RBP9.39□□□□□ -0.91
CKAP2-204ENST00000459902 GFRA1P56159 465 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 ERVFC1P60507 584 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 CBLL1Q75N03 491 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 HHIPL1Q96JK4 782 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 CCDC140Q96MF4 163 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 PTCHD1Q96NR3 888 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 IER2Q9BTL4 223 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 ADGRE2Q9UHX3 823 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 CTNND2Q9UQB3 1225 aa9.39□□□□□ -0.91
CKAP2-204ENST00000459902 FADS2P1A8MWK0 482 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 PRODHO43272 600 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 THBDP07204 575 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 FGFR1P11362 822 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 ECI1P42126 302 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 PRSS53Q2L4Q9 553 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 FOXB2Q5VYV0 432 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
CKAP2-204ENST00000459902 NAT16Q8N8M0 369 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 PDZD8Q8NEN9 1154 aa9.38□□□□□ -0.91
CKAP2-204ENST00000459902 FRS2Q8WU20 508 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms