RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 RABGAP1Q9Y3P9 1069 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 CNTNAP5Q8WYK1 1306 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 WDR90Q96KV7 1748 aa6.67□□□□□ -1.34
RNU1-88P-201ENST00000459274 SIPA1L1O43166 1804 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 GREB1LQ9C091 1923 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 hCG_1642624A0A1W2PR95 340 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ESYT2A0FGR8 921 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 BTBD18B2RXH4 712 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 CXCL11O14625 94 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PLA2G6O60733 806 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 KINO60870 393 aaKnown RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 EGFRP00533 1210 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 SNHG28P0DPA3 235 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 INPP5BP32019 993 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 SLC16A2P36021 539 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 NOVP48745 357 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRELPP51888 382 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 HIRAP54198 1017 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 KIF23Q02241 960 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 MTMR2Q13614 643 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PKP1Q13835 747 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 USH1GQ495M9 461 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 NOL9Q5SY16 702 aaKnown RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 MYSM1Q5VVJ2 828 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRAMEF18Q5VWM3 479 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ANO1Q5XXA6 986 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 GADL1Q6ZQY3 521 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PIK3AP1Q6ZUJ8 805 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF526Q8TF50 670 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 GTF3C2Q8WUA4 911 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 GPKOWQ92917 476 aaPredicted RBP eCLIP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZKSCAN4Q969J2 545 aaPredicted RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZMYND12Q9H0C1 365 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 DNAJC18Q9H819 358 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 POLR3EQ9NVU0 708 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 MAP3K20Q9NYL2 800 aaKnown RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 RTEL1Q9NZ71 1219 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 PGAP2Q9UHJ9 254 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ZNF112Q9UJU3 913 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 SCAF8Q9UPN6 1271 aaKnown RBP6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 CNPY2Q9Y2B0 182 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 STK24Q9Y6E0 443 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ELP1O95163 1332 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 ABCB11O95342 1321 aa6.66□□□□□ -1.34
RNU1-88P-201ENST00000459274 TRPM7Q96QT4 1865 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 PHF20L1A8MW92 1017 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 ADM5C9JUS6 153 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 GCOM1H8Y6P7 765 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CTAGE5O15320 804 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CUTAO60888 179 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 USP2O75604 605 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 POLR2MP0CAP2 368 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CETPP11597 493 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 GCFC2P16383 781 aaKnown RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 COPB2P35606 906 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 ECE1P42892 770 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 HMGCS2P54868 508 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 ST3GAL1Q11201 340 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 RESTQ13127 1097 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 AP3B2Q13367 1082 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 ORC2Q13416 577 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 SNAPC2Q13487 334 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 COL9A3Q14050 684 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 PLS1Q14651 629 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 QRICH1Q2TAL8 776 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 KLHL40Q2TBA0 621 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 TTC38Q5R3I4 469 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CHADLQ6NUI6 762 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 KANK3Q6NY19 840 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCDC174Q6PII3 467 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 BTNL9Q6UXG8 535 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CLEC10AQ8IUN9 316 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CPXCR1Q8N123 301 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 MB21D1Q8N884 522 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 KRI1Q8N9T8 703 aaKnown RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 DAGLBQ8NCG7 672 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 PROCA1Q8NCQ7 364 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCDC47Q96A33 483 aaKnown RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 FERMT2Q96AC1 680 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 AIFM3Q96NN9 605 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 SDF4Q9BRK5 362 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 RPAP3Q9H6T3 665 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 ELP3Q9H9T3 547 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 JMJD4Q9H9V9 463 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 GBA2Q9HCG7 927 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 RIC8AQ9NPQ8 531 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 BIN2Q9UBW5 565 aaPredicted RBP6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 CCPG1Q9ULG6 757 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 PRR12Q9ULL5 1215 aa6.65□□□□□ -1.34
RNU1-88P-201ENST00000459274 STXBP3O00186 592 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms