RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 COL11A1P12107 1806 aaPredicted RBP10.09□□□□□ -0.79
RIF1-208ENST00000457745 LOC285556D6RIA3 1793 aa10.09□□□□□ -0.79
RIF1-208ENST00000457745 ZC3H4Q9UPT8 1303 aaKnown RBP10.08□□□□□ -0.8
RIF1-208ENST00000457745 OPLAHO14841 1288 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 PEX10O60683 326 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 CTNND1O60716 968 aaKnown RBP10.08□□□□□ -0.8
RIF1-208ENST00000457745 GJA5P36382 358 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 SLC1A4P43007 532 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 GRIN1Q05586 938 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 MTMR2Q13614 643 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 VGLL4Q14135 290 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 PPP2R5BQ15173 497 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 PTPAQ15257 358 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 USP50Q70EL3 339 aaPredicted RBP10.08□□□□□ -0.8
RIF1-208ENST00000457745 PDCD7Q8N8D1 485 aaKnown RBP10.08□□□□□ -0.8
RIF1-208ENST00000457745 ZNF526Q8TF50 670 aaPredicted RBP10.08□□□□□ -0.8
RIF1-208ENST00000457745 ANP32EQ9BTT0 268 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 PRR12Q9ULL5 1215 aa10.08□□□□□ -0.8
RIF1-208ENST00000457745 TMEM232C9JQI7 657 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 TRAK2O60296 914 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 BMP3P12645 472 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 SPP2Q13103 211 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 CDC37Q16543 378 aaPredicted RBP10.07□□□□□ -0.8
RIF1-208ENST00000457745 NOL9Q5SY16 702 aaKnown RBP10.07□□□□□ -0.8
RIF1-208ENST00000457745 SYDE2Q5VT97 1194 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 DPY19L2Q6NUT2 758 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 BTNL9Q6UXG8 535 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 DCPSQ96C86 337 aaKnown RBP10.07□□□□□ -0.8
RIF1-208ENST00000457745 GOLPH3LQ9H4A5 285 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 ARHGEF10LQ9HCE6 1279 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 BARHL2Q9NY43 387 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 ISY1Q9ULR0 285 aaKnown RBP10.07□□□□□ -0.8
RIF1-208ENST00000457745 PCDHA6Q9UN73 950 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 PCDHB6Q9Y5E3 794 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 PCDHA8Q9Y5H6 950 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 PPP2R3BQ9Y5P8 575 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 MYH7BA7E2Y1 1941 aa10.07□□□□□ -0.8
RIF1-208ENST00000457745 TRIM75PA6NK02 468 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 DDX11L8A8MPP1 907 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 ASNSP08243 561 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 LIG1P18858 919 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 NASPP49321 788 aaPredicted RBP10.06□□□□□ -0.8
RIF1-208ENST00000457745 GNAQP50148 359 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 UBE2SQ16763 222 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 DCAF15Q66K64 600 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 NOSTRINQ8IVI9 506 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 SULF1Q8IWU6 871 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 TBC1D5Q92609 795 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 LZTS2Q9BRK4 669 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 TMEM63CQ9P1W3 806 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 RCOR1Q9UKL0 485 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 A0A0G2JMZ2 1700 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 ZNF536O15090 1300 aa10.06□□□□□ -0.8
RIF1-208ENST00000457745 LCTP09848 1927 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 PNMA6FA0A0J9YX94 578 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 VCAM1P19320 739 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 ATP2B1P20020 1258 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 SMARCA1P28370 1054 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 KRT2P35908 639 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 HMGCS2P54868 508 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 NAPAP54920 295 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 NLRP5P59047 1200 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 KRT85P78386 507 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 MOGSQ13724 837 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 AXDND1Q5T1B0 1012 aaPredicted RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 GPATCH4Q5T3I0 446 aaKnown RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 ANO1Q5XXA6 986 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 BLIDQ8IZY5 108 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 DAGLBQ8NCG7 672 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 LINC00301Q8NCQ3 95 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 SLAIN1Q8ND83 568 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 WASF1Q92558 559 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 RRP36Q96EU6 259 aaKnown RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 WDR18Q9BV38 432 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 KIAA1683Q9H0B3 1180 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 GZF1Q9H116 711 aaPredicted RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 R3HDMLQ9H3Y0 253 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 ZSCAN16Q9H4T2 348 aaPredicted RBP10.05□□□□□ -0.8
RIF1-208ENST00000457745 RTEL1Q9NZ71 1219 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 AFG3L2Q9Y4W6 797 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 ZHX2Q9Y6X8 837 aa10.05□□□□□ -0.8
RIF1-208ENST00000457745 SMCO2A6NFE2 343 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 ZBTB5O15062 677 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 MARCKSP29966 332 aaPredicted RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 MAP3K9P80192 1104 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 SF3A1Q15459 793 aaKnown RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 IL17AQ16552 155 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 TREML2Q5T2D2 321 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 JAKMIP3Q5VZ66 844 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 CCDC174Q6PII3 467 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 PIK3AP1Q6ZUJ8 805 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 BRAPQ7Z569 592 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 RGS22Q8NE09 1264 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 ZC3H15Q8WU90 426 aaKnown RBP10.04□□□□□ -0.8
RIF1-208ENST00000457745 CLIC6Q96NY7 704 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 FEZ1Q99689 392 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 MFRPQ9BY79 579 aa10.04□□□□□ -0.8
RIF1-208ENST00000457745 ZMYND12Q9H0C1 365 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms