RNA–Protein interactions for RNA: ENST00000456331.6

PPP1R9A-208, Transcript of protein phosphatase 1 regulatory subunit 9A, humanhuman

TSL 1 (best) BASIC

Gene PPP1R9A, Length 10,090 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R9A-208ENST00000456331 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.4□□□□□ -1.71
PPP1R9A-208ENST00000456331 ACEP12821 1306 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 RGS12O14924 1447 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ANXA13P27216 316 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 SLFNL1Q499Z3 407 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 C6orf118Q5T5N4 469 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 SPATA1Q5VX52 437 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 NDUFAF2Q8N183 169 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 FOXP1Q9H334 677 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ABCF3Q9NUQ8 709 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 SYNMO15061 1565 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CEP104O60308 925 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TMOD1P28289 359 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 POLD1P28340 1107 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 OAS2P29728 719 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MARCKSP29966 332 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MYO1EQ12965 1108 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TRIM50Q86XT4 487 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 RNF34Q969K3 372 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 OLFML3Q9NRN5 406 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 C1orf112Q9NSG2 853 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ANAPC5Q9UJX4 755 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 POLR1AO95602 1720 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ARHGAP10A1A4S6 786 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 RANBP1P43487 201 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 SERPINB4P48594 390 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 GPATCH4Q5T3I0 446 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATP6V0A1Q93050 837 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ADPGKQ9BRR6 497 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 RABEP2Q9H5N1 569 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATG3Q9NT62 314 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MED23Q9ULK4 1368 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CCDC78A2IDD5 438 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 VWA3AA6NCI4 1184 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 VAMP4O75379 141 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ZSCAN20P17040 1043 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 LONRF2Q1L5Z9 754 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 LRRC8BQ6P9F7 803 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 LMBR1LQ6UX01 489 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TTC13Q8NBP0 860 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 GCOM2Q9BZD3 368 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 PRDM10Q9NQV6 1147 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CTNND2Q9UQB3 1225 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 COPG1Q9Y678 874 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ABCC12Q96J65 1359 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 STAM2O75886 525 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 KRT8P05787 483 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 GCKP35557 465 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 HDAC4P56524 1084 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TFDP1Q14186 410 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TRADDQ15628 312 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ST13P4Q8IZP2 240 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 YY1AP1Q9H869 796 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 BATF3Q9NR55 127 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 SLC12A6Q9UHW9 1150 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MRPL11Q9Y3B7 192 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 AFG3L2Q9Y4W6 797 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 KIF1BO60333 1816 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATP2C2O75185 946 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 PTK2Q05397 1052 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 PDCD7Q8N8D1 485 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 GTF3C6Q969F1 213 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CCDC17Q96LX7 622 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CNPY3Q9BT09 278 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 NFE2L3Q9Y4A8 694 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 TMEM247A6NEH6 219 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 POLR2DO15514 142 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 EXOC3O60645 756 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 HEXIM1O94992 359 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 GGPS1O95749 300 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CHEK2O96017 543 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATF2P15336 505 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATP5JP18859 108 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 PAMP19021 973 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ATP2B4P23634 1241 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 HPDP32754 393 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MFAP3P55082 362 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ARHGEF25Q86VW2 580 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CCDC13Q8IYE1 715 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MAGEB6Q8N7X4 407 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 DTX3LQ8TDB6 740 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 NELFBQ8WX92 580 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CARD6Q9BX69 1037 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 MRPL44Q9H9J2 332 aaKnown RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 ARMCX3Q9UH62 379 aaPredicted RBP4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 CDC23Q9UJX2 597 aa4.39□□□□□ -1.71
PPP1R9A-208ENST00000456331 IQANK1A0A1B0GTG1 560 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 KRIT1O00522 736 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 NOP56O00567 594 aaKnown RBP4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 SLC27A2O14975 620 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 OPHN1O60890 802 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 SERPINB10P48595 397 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 PHEXP78562 749 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 FSCBQ5H9T9 825 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 LRRC8AQ8IWT6 810 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 TEX11Q8IYF3 940 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 CHPF2Q9P2E5 772 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 HESX1Q9UBX0 185 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 ASXL2Q76L83 1435 aa4.38□□□□□ -1.71
PPP1R9A-208ENST00000456331 RFX7Q2KHR2 1363 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms