RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 FIBPO43427 364 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 BACE1P56817 501 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 KRT85P78386 507 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 SPP2Q13103 211 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 MTMR2Q13614 643 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 FAM83BQ5T0W9 1011 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 TTBK2Q6IQ55 1244 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 HOMER1Q86YM7 354 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 ADGRF4Q8IZF3 695 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 FAM177A1Q8N128 213 aaPredicted RBP18.12■□□□□ 0.49
SNX17-204ENST00000453453 ZNF713Q8N859 430 aaPredicted RBP18.12■□□□□ 0.49
SNX17-204ENST00000453453 CCDC148Q8NFR7 591 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 CCDC12Q8WUD4 166 aaPredicted RBP18.12■□□□□ 0.49
SNX17-204ENST00000453453 CHURC1Q8WUH1 139 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 ZNF830Q96NB3 372 aaPredicted RBP18.12■□□□□ 0.49
SNX17-204ENST00000453453 CPVLQ9H3G5 476 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 BRMS1Q9HCU9 246 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 SH3GLB2Q9NR46 395 aa18.12■□□□□ 0.49
SNX17-204ENST00000453453 DDX19AQ9NUU7 478 aaKnown RBP18.12■□□□□ 0.49
SNX17-204ENST00000453453 UNCXA6NJT0 531 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 SMTNL1A8MU46 457 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 UBE2Q2LH0YL09 131 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 CDC25BP30305 580 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 STAT2P52630 851 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 FKBP1BP68106 108 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 SYDE2Q5VT97 1194 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 TAF3Q5VWG9 929 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 OTUD7BQ6GQQ9 843 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 CHADLQ6NUI6 762 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 RBM43Q6ZSC3 357 aaKnown RBP18.11■□□□□ 0.49
SNX17-204ENST00000453453 FERMT3Q86UX7 667 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 FAM160B2Q86V87 743 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
SNX17-204ENST00000453453 PIGSQ96S52 555 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 FEM1BQ9UK73 627 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 MYH15Q9Y2K3 1946 aa18.11■□□□□ 0.49
SNX17-204ENST00000453453 TRIM75PA6NK02 468 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 TRAF5O00463 557 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 RIOK3O14730 519 aaKnown RBP18.1■□□□□ 0.49
SNX17-204ENST00000453453 SLC16A2P36021 539 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 SLC35G1Q2M3R5 365 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 BTNL9Q6UXG8 535 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 HEATR3Q7Z4Q2 680 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 ERO1BQ86YB8 467 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 NUP62CLQ9H1M0 184 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 JMJD4Q9H9V9 463 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 GPBP1L1Q9HC44 474 aaPredicted RBP18.1■□□□□ 0.49
SNX17-204ENST00000453453 TMOD4Q9NZQ9 345 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 VPS54Q9P1Q0 977 aa18.1■□□□□ 0.49
SNX17-204ENST00000453453 PNMA6FA0A0J9YX94 578 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 PLA2G6O60733 806 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 MMP1P03956 469 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 KIAA1755Q5JYT7 1200 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 SCAND2PQ9GZW5 306 aaPredicted RBP18.09■□□□□ 0.49
SNX17-204ENST00000453453 PYCARDQ9ULZ3 195 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 AFG3L2Q9Y4W6 797 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 PAXBP1Q9Y5B6 917 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 TRPM7Q96QT4 1865 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 ZBTB5O15062 677 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 CALML3P27482 149 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 PPATQ06203 517 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 RESTQ13127 1097 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 BRAPQ7Z569 592 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 C2orf69Q8N8R5 385 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 GJB4Q9NTQ9 266 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 BARHL2Q9NY43 387 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 OGFRQ9NZT2 677 aa18.09■□□□□ 0.49
SNX17-204ENST00000453453 NEMFO60524 1076 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 NAPAP54920 295 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 NLRP5P59047 1200 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 GABPB1Q06547 395 aaPredicted RBP18.08■□□□□ 0.48
SNX17-204ENST00000453453 TRAF1Q13077 416 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 WWC2Q6AWC2 1192 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 MOB2Q70IA6 237 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 GPKOWQ92917 476 aaPredicted RBP eCLIP18.08■□□□□ 0.48
SNX17-204ENST00000453453 C12orf42Q96LP6 360 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 PHF20Q9BVI0 1012 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 TANGO6Q9C0B7 1094 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 GBA2Q9HCG7 927 aaPredicted RBP18.08■□□□□ 0.48
SNX17-204ENST00000453453 KCNJ14Q9UNX9 436 aa18.08■□□□□ 0.48
SNX17-204ENST00000453453 PTPRFP10586 1907 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 SPDYE5A6NIY4 337 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 CELF2O95319 508 aaKnown RBP18.07■□□□□ 0.48
SNX17-204ENST00000453453 VCAM1P19320 739 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 KRT2P35908 639 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 HMGCS2P54868 508 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 KIF23Q02241 960 aaPredicted RBP18.07■□□□□ 0.48
SNX17-204ENST00000453453 DNM1Q05193 864 aaKnown RBP18.07■□□□□ 0.48
SNX17-204ENST00000453453 TYRO3Q06418 890 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 CDC37Q16543 378 aaPredicted RBP18.07■□□□□ 0.48
SNX17-204ENST00000453453 GALNT17Q6IS24 598 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 PPP1R18Q6NYC8 613 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 MTMR8Q96EF0 704 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 CLMNQ96JQ2 1002 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 EMILIN3Q9NT22 766 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 CGNQ9P2M7 1197 aaKnown RBP18.07■□□□□ 0.48
SNX17-204ENST00000453453 PRR12Q9ULL5 1215 aa18.07■□□□□ 0.48
SNX17-204ENST00000453453 STXBP3O00186 592 aa18.06■□□□□ 0.48
SNX17-204ENST00000453453 AP5Z1O43299 807 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms