RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 CCDC174Q6PII3 467 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 ZNF444Q8N0Y2 327 aaPredicted RBP13.93□□□□□ -0.18
HERC3-207ENST00000452979 ANKRD35Q8N283 1001 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 GMCL1P1Q8NEA9 526 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 APPBP2Q92624 585 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 OSBP2Q969R2 916 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 KIFC2Q96AC6 838 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 TIFAQ96CG3 184 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 SPC25Q9HBM1 224 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 ZNF287Q9HBT7 754 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 RAVER2Q9HCJ3 691 aaKnown RBP13.93□□□□□ -0.18
HERC3-207ENST00000452979 MTMR4Q9NYA4 1195 aa13.93□□□□□ -0.18
HERC3-207ENST00000452979 RNF113AO15541 343 aaKnown RBP13.92□□□□□ -0.18
HERC3-207ENST00000452979 SMARCA5O60264 1052 aaPredicted RBP13.92□□□□□ -0.18
HERC3-207ENST00000452979 TTLL1O95922 423 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 CD4P01730 458 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 GNAT2P19087 354 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 GNASQ5JWF2 1037 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 FAM126BQ8IXS8 530 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 STK11IPQ8N1F8 1099 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 TMEM199Q8N511 208 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 CEP95Q96GE4 821 aa13.92□□□□□ -0.18
HERC3-207ENST00000452979 EPB41L4AQ9HCS5 686 aaPredicted RBP13.92□□□□□ -0.18
HERC3-207ENST00000452979 CTDP1Q9Y5B0 961 aaPredicted RBP13.92□□□□□ -0.18
HERC3-207ENST00000452979 A0A0U1RQG5 324 aaPredicted RBP13.91□□□□□ -0.18
HERC3-207ENST00000452979 PATL2C9JE40 543 aaKnown RBP13.91□□□□□ -0.18
HERC3-207ENST00000452979 GPAA1O43292 621 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
HERC3-207ENST00000452979 ZFYP08048 801 aaPredicted RBP13.91□□□□□ -0.18
HERC3-207ENST00000452979 SLC4A3P48751 1232 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 TJAP1Q5JTD0 557 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 ARMCX2Q7L311 632 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 CCDC144CPQ8IYA2 1237 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 USP38Q8NB14 1042 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 SLC43A3Q8NBI5 491 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 NEDD1Q8NHV4 660 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
HERC3-207ENST00000452979 MUC3AQ02505 3323 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
HERC3-207ENST00000452979 BMP3P12645 472 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 CSF2RAP15509 400 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 PBX2P40425 430 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 SLFN13Q68D06 897 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 PSRC1Q6PGN9 363 aaPredicted RBP13.9□□□□□ -0.18
HERC3-207ENST00000452979 ZNF365Q70YC5 407 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 IFNL3Q8IZI9 196 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 VTI1AQ96AJ9 217 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 SEZ6LQ9BYH1 1024 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
HERC3-207ENST00000452979 ZNF536O15090 1300 aa13.9□□□□□ -0.19
HERC3-207ENST00000452979 SOWAHBA6NEL2 793 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 GRXCR1A8MXD5 290 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 PLA2G6O60733 806 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 PRDM1O75626 825 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 TDO2P48775 406 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
HERC3-207ENST00000452979 TNFAIP2Q03169 654 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 AKNAD1Q5T1N1 836 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 CCDC129Q6ZRS4 1044 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 LRRC47Q8N1G4 583 aaKnown RBP13.89□□□□□ -0.19
HERC3-207ENST00000452979 HERVK_113Q902F9 699 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 GMCL1Q96IK5 515 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 DCTPP1Q9H773 170 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 ACAD9Q9H845 621 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 IL23AQ9NPF7 189 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 GNEQ9Y223 722 aaKnown RBP13.89□□□□□ -0.19
HERC3-207ENST00000452979 GBF1Q92538 1859 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 ASTN1O14525 1302 aa13.89□□□□□ -0.19
HERC3-207ENST00000452979 ASB14A6NK59 587 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 TMEM232C9JQI7 657 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 M0R2C6 588 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 CABYRO75952 493 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 APPP05067 770 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 ACRP10323 421 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 STAT2P52630 851 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 PDE4BQ07343 736 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 TKFCQ3LXA3 575 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 FAM160B2Q86V87 743 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 CHURC1Q8WUH1 139 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 STAG1Q8WVM7 1258 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 ATXN2LQ8WWM7 1075 aaKnown RBP13.88□□□□□ -0.19
HERC3-207ENST00000452979 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
HERC3-207ENST00000452979 Q9Y3F1 56 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 GRIN2DO15399 1336 aa13.88□□□□□ -0.19
HERC3-207ENST00000452979 LRRC37A2A6NM11 1700 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.87□□□□□ -0.19
HERC3-207ENST00000452979 TNFRSF10AO00220 468 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 TSPY3P0CV98 308 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 TSPY8P0CW00 308 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 CYP2C18P33260 490 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 BEX3Q00994 111 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 TFAP4Q01664 338 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 RAB30Q15771 203 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 LRRFIP1Q32MZ4 808 aaKnown RBP13.87□□□□□ -0.19
HERC3-207ENST00000452979 IQSEC1Q6DN90 963 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 CXCL17Q6UXB2 119 aa13.87□□□□□ -0.19
HERC3-207ENST00000452979 GPATCH3Q96I76 525 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms