RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PAPOLBQ9NRJ5 636 aaKnown RBP20.7■□□□□ 0.9
PTPA-223ENST00000452489 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
PTPA-223ENST00000452489 NFXL1Q6ZNB6 911 aa20.7■□□□□ 0.9
PTPA-223ENST00000452489 IFT20Q8IY31 132 aa20.7■□□□□ 0.9
PTPA-223ENST00000452489 KLHL23Q8NBE8 558 aa20.7■□□□□ 0.9
PTPA-223ENST00000452489 LMCD1Q9NZU5 365 aa20.7■□□□□ 0.9
PTPA-223ENST00000452489 CNOT8Q9UFF9 292 aaKnown RBP20.7■□□□□ 0.9
PTPA-223ENST00000452489 WDR17Q8IZU2 1322 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 A6NHS1 94 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 BTBD18B2RXH4 712 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 PES1O00541 588 aaKnown RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 NCK2O43639 380 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 PAK2Q13177 524 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 ARFGAP2Q8N6H7 521 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 NOC3LQ8WTT2 800 aaKnown RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 EZH1Q92800 747 aaPredicted RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 RBM33Q96EV2 1170 aaKnown RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 LRWD1Q9UFC0 647 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 PCDHB6Q9Y5E3 794 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 SPDYE3A6NKU9 549 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 HEXIM1O94992 359 aaKnown RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 C4AP0C0L4 1744 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 C4BP0C0L5 1744 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 ATP4AP20648 1035 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 TRIM29Q14134 588 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 CPLX4Q7Z7G2 160 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 PAGE5Q96GU1 130 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 NHEJ1Q9H9Q4 299 aaPredicted RBP20.69■□□□□ 0.9
PTPA-223ENST00000452489 GDF3Q9NR23 364 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 VPS54Q9P1Q0 977 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 DENND2AQ9ULE3 1009 aa20.69■□□□□ 0.9
PTPA-223ENST00000452489 TRIM37O94972 964 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 MOCS3O95396 460 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 METAP2P50579 478 aaKnown RBP eCLIP20.68■□□□□ 0.95e-6■□□□□ 8.3
PTPA-223ENST00000452489 TSR1Q2NL82 804 aaKnown RBP20.68■□□□□ 0.9
PTPA-223ENST00000452489 CHADLQ6NUI6 762 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 NOSTRINQ8IVI9 506 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 MREGQ8N565 214 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 MS4A14Q96JA4 679 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 F8W031 263 aaPredicted RBP20.68■□□□□ 0.9
PTPA-223ENST00000452489 MAP3K13O43283 966 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 CTCFP49711 727 aaPredicted RBP20.68■□□□□ 0.9
PTPA-223ENST00000452489 KIF5AQ12840 1032 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 RIPK1Q13546 671 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 KRT26Q7Z3Y9 468 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 MFN1Q8IWA4 741 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 SPICE1Q8N0Z3 855 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 LINS1Q8NG48 757 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 NKX2-3Q8TAU0 364 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 EPSTI1Q96J88 318 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 TSC22D3Q99576 134 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 AGPAT5Q9NUQ2 364 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 FLT4P35916 1363 aa20.68■□□□□ 0.9
PTPA-223ENST00000452489 GOLGA6L10A6NI86 522 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 CCT8L1PA6NM43 557 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 H7C1W4 665 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 CYLC1P35663 651 aaPredicted RBP20.67■□□□□ 0.9
PTPA-223ENST00000452489 MAEAQ7L5Y9 396 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 C1orf131Q8NDD1 294 aaKnown RBP20.67■□□□□ 0.9
PTPA-223ENST00000452489 P3H4Q92791 437 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 LGR6Q9HBX8 967 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 ZFATQ9P243 1243 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 UTYO14607 1347 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 A0A1B0GVG6 124 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 FOXP2O15409 715 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 AIMP1Q12904 312 aaKnown RBP20.67■□□□□ 0.9
PTPA-223ENST00000452489 SLMAPQ14BN4 828 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 CCDC96Q2M329 555 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 CCHCR1Q8TD31 782 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 CASKIN2Q8WXE0 1202 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 PRCCQ92733 491 aaPredicted RBP20.67■□□□□ 0.9
PTPA-223ENST00000452489 EPAS1Q99814 870 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 TAF1DQ9H5J8 278 aaPredicted RBP20.67■□□□□ 0.9
PTPA-223ENST00000452489 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
PTPA-223ENST00000452489 ZNF263O14978 683 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 RANBP6O60518 1105 aaKnown RBP20.66■□□□□ 0.9
PTPA-223ENST00000452489 DRD4P21917 467 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 MICU3Q86XE3 530 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 B4GALNT2Q8NHY0 566 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 OSBPL1AQ9BXW6 950 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 SENP2Q9HC62 589 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 CAPN11Q9UMQ6 739 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 ACEP12821 1306 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 MLH3Q9UHC1 1453 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 GCOM1H8Y6P7 765 aaPredicted RBP20.66■□□□□ 0.9
PTPA-223ENST00000452489 LIN7AO14910 233 aaPredicted RBP20.66■□□□□ 0.9
PTPA-223ENST00000452489 MYZAPP0CAP1 466 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 RANBP1P43487 201 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 USP4Q13107 963 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 RRAGBQ5VZM2 374 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 MB21D1Q8N884 522 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 CNKSR1Q969H4 720 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 PAIP2Q9BPZ3 127 aaKnown RBP20.66■□□□□ 0.9
PTPA-223ENST00000452489 PIDD1Q9HB75 910 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 SLC12A4Q9UP95 1085 aa20.66■□□□□ 0.9
PTPA-223ENST00000452489 MAPK8IP1Q9UQF2 711 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms