RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 AGR2O95994 175 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 PGRP06401 933 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 FAM153BP0C7A2 387 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 PHKG2P15735 406 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SCP2P22307 547 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 ATICP31939 592 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 PCDH1Q08174 1060 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 MINDY4Q4G0A6 757 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 GLIPR1L2Q4G1C9 344 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SEZ6Q53EL9 994 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SPECC1Q5M775 1068 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 ARMC3Q5W041 872 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RNF219Q5W0B1 726 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RASSF3Q86WH2 238 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 GOLM1Q8NBJ4 401 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 OR6P1Q8NGX9 317 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 GJA10Q969M2 543 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 TNIP3Q96KP6 325 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 MYCBPQ99417 103 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RUSC1Q9BVN2 902 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 TARS2Q9BW92 718 aaKnown RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 TNKS2Q9H2K2 1166 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 CLEC4MQ9H2X3 399 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 SOX17Q9H6I2 414 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RIC8AQ9NPQ8 531 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 GTF2IRD1Q9UHL9 959 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 FEZ2Q9UHY8 353 aaPredicted RBP5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 RCAN3Q9UKA8 241 aa5.32□□□□□ -1.56
HMGB3P21-201ENST00000452483 PHLDB1Q86UU1 1377 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 GREM1O60565 184 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 TYRP1P17643 537 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 MCM4P33991 863 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 CCT5P48643 541 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZNF280AP59817 542 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 SLC9A5Q14940 896 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 TAF11Q15544 211 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 SPRED3Q2MJR0 410 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 MZT2AQ6P582 158 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 LVRNQ6Q4G3 990 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 RSRC2Q7L4I2 434 aaKnown RBP5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 SLITRK4Q8IW52 837 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 HSCBQ8IWL3 235 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 TPH2Q8IWU9 490 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 ATXN2LQ8WWM7 1075 aaKnown RBP5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZNF669Q96BR6 464 aaPredicted RBP5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 PGBD4Q96DM1 585 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 RHOVQ96L33 236 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 USP26Q9BXU7 913 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 CEP41Q9BYV8 373 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZNF576Q9H609 170 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 ABCB6Q9NP58 842 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 NLRC4Q9NPP4 1024 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 KCNQ5Q9NR82 932 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 TRHDEQ9UKU6 1024 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 DMTF1Q9Y222 760 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 SPEF1Q9Y4P9 236 aa5.31□□□□□ -1.56
HMGB3P21-201ENST00000452483 SETD1BQ9UPS6 1966 aaKnown RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 DNAJC25-GNG10A0A024R161 153 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 LOC100289279A0A1B0GTE1 492 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 B2RBV5 119 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 F5H423 210 aaPredicted RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 GPR39O43194 453 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PF4P02776 101 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 ITPKAP23677 461 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 CRKP46108 304 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 GSTM4Q03013 218 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 GRM2Q14416 872 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 ZC3H12BQ5HYM0 836 aaKnown RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 TSHZ3Q63HK5 1081 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PRR23CQ6ZRP0 262 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 LHFPL2Q6ZUX7 228 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 LRRTM3Q86VH5 581 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 SKAP1Q86WV1 359 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 KIAA1958Q8N8K9 716 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PARD3BQ8TEW8 1205 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 RPGRQ92834 1020 aaKnown RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 TTC17Q96AE7 1141 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 KIF2CQ99661 725 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 SPATA9Q9BWV2 254 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PUS7LQ9H0K6 701 aaKnown RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 RNF208Q9H0X6 261 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PPP4R2Q9NY27 417 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 PHTF1Q9UMS5 762 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 TRAK1Q9UPV9 953 aa5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 LUC7L2Q9Y383 392 aaKnown RBP5.3□□□□□ -1.56
HMGB3P21-201ENST00000452483 TLR3O15455 904 aaKnown RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 MTA2O94776 668 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 B3GALT4O96024 378 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 TGFB3P10600 412 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 SLC5A1P13866 664 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 GARTP22102 1010 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 EIF5P55010 431 aaKnown RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 TBX2Q13207 712 aaPredicted RBP5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 STAT4Q14765 748 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 KRT72Q14CN4 511 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 ELF2Q15723 593 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 LONRF2Q1L5Z9 754 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 UVSSAQ2YD98 709 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 ARHGAP29Q52LW3 1261 aa5.29□□□□□ -1.56
HMGB3P21-201ENST00000452483 PRSS36Q5K4E3 855 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms