RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 TIMMDC1Q9NPL8 285 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZBTB40Q9NUA8 1239 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 UBAP1Q9NZ09 502 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SSX2IPQ9Y2D8 614 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 C15orf41Q9Y2V0 281 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NSD3Q9BZ95 1437 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PRDM15P57071 1507 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8TH3BQL2 631 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 HGSO14964 777 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 RTN3O95197 1032 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 CYP2E1P05181 493 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 GOLGA8HP0CJ92 632 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 CPA3P15088 417 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 KCNA2P16389 499 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 KCNA3P22001 575 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 STX2P32856 288 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 PLA2G4AP47712 749 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 GYS2P54840 703 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 FBLN2P98095 1184 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 LBRQ14739 615 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 TBCCQ15814 346 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NFE2L2Q16236 605 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 KRT71Q3SY84 523 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TDRD12Q587J7 1177 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 ESCO1Q5FWF5 840 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 C10orf76Q5T2E6 689 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TMEM154Q6P9G4 183 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TMED8Q6PL24 325 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 VSTM4Q8IW00 320 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 ZGPATQ8N5A5 531 aaKnown RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 CCDC89Q8N998 374 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 NLRP7Q8WX94 980 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 RSPH1Q8WYR4 309 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SEPT8Q92599 483 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 SKA1Q96BD8 255 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 C9orf78Q9NZ63 289 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 FARP1Q9Y4F1 1045 aaPredicted RBP2.42□□□□□ -2.02
USP53-202ENST00000450251 PCDHB15Q9Y5E8 787 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 USP19O94966 1318 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 UBE4BO95155 1302 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 TTC21AQ8NDW8 1320 aa2.42□□□□□ -2.02
USP53-202ENST00000450251 MBD5Q9P267 1494 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 A0A087WZG4 1122 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 IQANK1A0A1B0GTG1 560 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 KDM4FA0A1W2PPD8 638 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NVLO15381 856 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 PPP1R37O75864 691 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ATP6V1G2O95670 118 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CCDC159P0C7I6 412 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PRKAR2AP13861 404 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 RAP1GDS1P52306 607 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PPP2R2AP63151 447 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 GUCY1B3Q02153 619 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CCDC144BQ3MJ40 725 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 BICDL1Q6ZP65 573 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ZC3H18Q86VM9 953 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 CCDC144CPQ8IYA2 1237 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SYCP3Q8IZU3 236 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 STKLD1Q8NE28 680 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 DNAJC9Q8WXX5 260 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MKL1Q969V6 931 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CHMP6Q96FZ7 201 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HIC2Q96JB3 615 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PBKQ96KB5 322 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 CCDC43Q96MW1 224 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 FERMT1Q9BQL6 677 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 RANBP17Q9H2T7 1088 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 ECT2Q9H8V3 914 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 INTS9Q9NV88 658 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 TBCCD1Q9NVR7 557 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TPCN1Q9ULQ1 816 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HPCAL4Q9UM19 191 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 DYTNA2CJ06 578 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MAP3K13O43283 966 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 COQ9O75208 318 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NPTXRO95502 500 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MCF2P10911 925 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PYGBP11216 843 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 MDH1P40925 334 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 USP14P54578 494 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SSRP1Q08945 709 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 FCHO2Q0JRZ9 810 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PSMD6Q15008 389 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 C11orf91Q3C1V1 193 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 SPDYCQ5MJ68 293 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 WASHC2DQ5SRD0 308 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 ANKRD20A3Q5VUR7 823 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 FBXW10Q5XX13 1052 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HDDC2Q7Z4H3 204 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PALM2Q8IXS6 379 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TRMT2AQ8IZ69 625 aaKnown RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 UBL4BQ8N7F7 174 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PPP1R14CQ8TAE6 165 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TBC1D5Q92609 795 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PHF12Q96QT6 1004 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 NR1H4Q96RI1 486 aaPredicted RBP2.41□□□□□ -2.02
USP53-202ENST00000450251 SH3GL2Q99962 352 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 TRIM15Q9C019 465 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 PPCSQ9HAB8 311 aa2.41□□□□□ -2.02
USP53-202ENST00000450251 HOMER2Q9NSB8 354 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms