RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 SOWAHDA6NJG2 315 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 HGSO14964 777 aaPredicted RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 TRAPPC10P48553 1259 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 IRX3P78415 501 aaPredicted RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 BRD3Q15059 726 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 DOK7Q18PE1 504 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 CPLX4Q7Z7G2 160 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 MB21D2Q8IYB1 491 aaPredicted RBP7.93□□□□□ -1.14
BEST1-202ENST00000449131 SLC35F6Q8N357 371 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 RDH13Q8NBN7 331 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 CCDC26Q8TAB7 109 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 JDP2Q8WYK2 163 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 DYNLL2Q96FJ2 89 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 OVOS2A0A0J9YW53 1432 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 OVOS2Q6IE36 1432 aa7.93□□□□□ -1.14
BEST1-202ENST00000449131 GOLGA6CA6NDK9 693 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 PLEKHA8P1O95397 391 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GOLGA6DP0CG33 693 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 ATP2B4P23634 1241 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GTF2A1P52655 376 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 DIXDC1Q155Q3 683 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 WHAMMP3Q1A5X7 153 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 TSGA10IPQ3SY00 556 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GALNT17Q6IS24 598 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GSTA5Q7RTV2 222 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 ATG9AQ7Z3C6 839 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 KIAA0825Q8IV33 1275 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 VSTM4Q8IW00 320 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 FMR1NBQ8N0W7 255 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 TEKT1Q969V4 418 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 TUBGCP2Q9BSJ2 902 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 LSM14BQ9BX40 385 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GOLGA6AQ9NYA3 693 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 GOLGA6BA6NDN3 693 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 SEMA3EO15041 775 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 PRPF3O43395 683 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 SPOPO43791 374 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 EXOC3O60645 756 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 MKRN3Q13064 507 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 RPS6KA1Q15418 735 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 RABL6Q3YEC7 729 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 PRR16Q569H4 304 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 TPH2Q8IWU9 490 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 IFT20Q8IY31 132 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 ACRBPQ8NEB7 543 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 DPF2Q92785 391 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 CCDC77Q9BR77 488 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 ISCA1Q9BUE6 129 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 MTRF1LQ9UGC7 380 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 NEDD4P46934 1319 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 USP42Q9H9J4 1324 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 B4DLN1 442 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 CDC27P30260 824 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 HNRNPH2P55795 449 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 BIRC3Q13489 604 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 PPP1R7Q15435 360 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 CFAP221Q4G0U5 840 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 SARM1Q6SZW1 724 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 SH2D4AQ9H788 454 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 MTUS1Q9ULD2 1270 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 PCDHA4Q9UN74 947 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 NCOA3Q9Y6Q9 1424 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 KIF13AQ9H1H9 1805 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 HARSP12081 509 aaKnown RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 MYCLP12524 364 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 CALCOCO2Q13137 446 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 CDC23Q9UJX2 597 aa7.92□□□□□ -1.14
BEST1-202ENST00000449131 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.92□□□□□ -1.14
BEST1-202ENST00000449131 BUB1O43683 1085 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 FLOT1O75955 427 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 KRT5P13647 590 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PTPREP23469 700 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 MECOMQ03112 1051 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 TERF2Q15554 542 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 FAM26FQ5R3K3 315 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 TRIM58Q8NG06 486 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 CNOT6LQ96LI5 555 aaKnown RBP7.91□□□□□ -1.14
BEST1-202ENST00000449131 ALDH8A1Q9H2A2 487 aaPredicted RBP7.91□□□□□ -1.14
BEST1-202ENST00000449131 SRP68Q9UHB9 627 aaKnown RBP7.91□□□□□ -1.14
BEST1-202ENST00000449131 IKBKGQ9Y6K9 419 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 NDUFAB1O14561 156 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 KIF4AO95239 1232 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PNMA6AP0CW24 399 aaPredicted RBP7.91□□□□□ -1.14
BEST1-202ENST00000449131 ARHGAP44Q17R89 818 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 SEL1L2Q5TEA6 688 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 CCDC121Q6ZUS5 278 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 DPH6Q7L8W6 267 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PEX26Q7Z412 305 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PLA2G4DQ86XP0 818 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PAGE5Q96GU1 130 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 PARD6BQ9BYG5 372 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 CTTNBP2NLQ9P2B4 639 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 DDX41Q9UJV9 622 aaKnown RBP7.91□□□□□ -1.14
BEST1-202ENST00000449131 USP17L3A6NCW0 530 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 USP17L4A6NCW7 530 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 H0YIN7 160 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 STK25O00506 426 aa7.91□□□□□ -1.14
BEST1-202ENST00000449131 EXOSC10Q01780 885 aaKnown RBP7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms