RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 BTBD19C9JJ37 291 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 SNAP25P60880 206 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 FBXO18Q8NFZ0 1043 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 GPKOWQ92917 476 aaPredicted RBP eCLIP16.22■□□□□ 0.19
SHMT2-203ENST00000449049 ATG4CQ96DT6 458 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 HOXC10Q9NYD6 342 aa16.22■□□□□ 0.19
SHMT2-203ENST00000449049 STXBP3O00186 592 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 VWA5AO00534 786 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 STX6O43752 255 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 LBX2Q6XYB7 198 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 REPS2Q8NFH8 660 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 ASCC2Q9H1I8 757 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-203ENST00000449049 GJB4Q9NTQ9 266 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 VPS54Q9P1Q0 977 aa16.21■□□□□ 0.19
SHMT2-203ENST00000449049 COL11A1P12107 1806 aaPredicted RBP16.21■□□□□ 0.19
SHMT2-203ENST00000449049 ZNF536O15090 1300 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 XBP1P17861 261 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 OSBPP22059 807 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 IRX3P78415 501 aaPredicted RBP16.21■□□□□ 0.18
SHMT2-203ENST00000449049 TYW1BQ6NUM6 668 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.18
SHMT2-203ENST00000449049 PTPN18Q99952 460 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 AMNQ9BXJ7 453 aa16.21■□□□□ 0.18
SHMT2-203ENST00000449049 BAZ2BQ9UIF8 2168 aaKnown RBP16.2■□□□□ 0.18
SHMT2-203ENST00000449049 ZBED4O75132 1171 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 FOSBP53539 338 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 PKP1Q13835 747 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 TRIM29Q14134 588 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 KRT40Q6A162 431 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 PPP1R18Q6NYC8 613 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 FBXO11Q86XK2 927 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 PHF20Q9BVI0 1012 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 PNMA3Q9UL41 463 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 MTMR6Q9Y217 621 aa16.2■□□□□ 0.18
SHMT2-203ENST00000449049 PDHXO00330 501 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 ICAM1P05362 532 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 OAZ1P54368 228 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 INHBEP58166 350 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 OTUD7BQ6GQQ9 843 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 CYP4F22Q6NT55 531 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 CCDC174Q6PII3 467 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 FAM43AQ8N2R8 423 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 CCDC148Q8NFR7 591 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 CCDC12Q8WUD4 166 aaPredicted RBP16.19■□□□□ 0.18
SHMT2-203ENST00000449049 P2RX7Q99572 595 aaKnown RBP16.19■□□□□ 0.18
SHMT2-203ENST00000449049 ZCCHC17Q9NP64 241 aaKnown RBP16.19■□□□□ 0.18
SHMT2-203ENST00000449049 CHMP5Q9NZZ3 219 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 H3BQV1 296 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 ATP2A1O14983 1001 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 HERVK_113P62684 666 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 NUCB2P80303 420 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 TRAF1Q13077 416 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 POTEEQ6S8J3 1075 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 COA7Q96BR5 231 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 PNMA2Q9UL42 364 aa16.19■□□□□ 0.18
SHMT2-203ENST00000449049 ESYT2A0FGR8 921 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 VPS37CA5D8V6 355 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 BRD1O95696 1058 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 MMP1P03956 469 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 NAPAP54920 295 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 GUCY1B3Q02153 619 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 MB21D1Q8N884 522 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 ZNF214Q9UL59 606 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 KCNJ14Q9UNX9 436 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 ZDHHC9Q9Y397 364 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 WDR33Q9C0J8 1336 aaKnown RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 SREBF2Q12772 1141 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 NPY5RQ15761 445 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 PAXIP1Q6ZW49 1069 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 GTF3C2Q8WUA4 911 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 ZMYND12Q9H0C1 365 aa16.18■□□□□ 0.18
SHMT2-203ENST00000449049 CTDP1Q9Y5B0 961 aaPredicted RBP16.18■□□□□ 0.18
SHMT2-203ENST00000449049 IGF2BP3O00425 579 aaKnown RBP eCLIP16.17■□□□□ 0.18
SHMT2-203ENST00000449049 ZSCAN22P10073 491 aaPredicted RBP16.17■□□□□ 0.18
SHMT2-203ENST00000449049 NOGQ13253 232 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 TMEM132BQ14DG7 1078 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 USH1GQ495M9 461 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 CAPNS2Q96L46 248 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 AGBL1Q96MI9 1066 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 RAVER2Q9HCJ3 691 aaKnown RBP16.17■□□□□ 0.18
SHMT2-203ENST00000449049 CCPG1Q9ULG6 757 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 ABCB11O95342 1321 aa16.17■□□□□ 0.18
SHMT2-203ENST00000449049 CALML3P27482 149 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 TM4SF4P48230 202 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 NLRP5P59047 1200 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 GALNT17Q6IS24 598 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 IFNL1Q8IU54 200 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 DAGLBQ8NCG7 672 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 THSD7BQ9C0I4 1608 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 CNMDO75829 334 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 CYP2C8P10632 490 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 TAL1P17542 331 aaPredicted RBP16.16■□□□□ 0.18
SHMT2-203ENST00000449049 CPXCR1Q8N123 301 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 ZIC5Q96T25 663 aa16.16■□□□□ 0.18
SHMT2-203ENST00000449049 PARK7Q99497 189 aaKnown RBP16.16■□□□□ 0.18
SHMT2-203ENST00000449049 BTBD7Q9P203 1132 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms