RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 HDAC1Q13547 482 aaPredicted RBP33.52■■■□□ 2.96
CBX4-202ENST00000448310 ACVR2BQ13705 512 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 FAM160B2Q86V87 743 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 CHURC1Q8WUH1 139 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 STAG1Q8WVM7 1258 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 FAM227BQ96M60 508 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 MTMR7Q9Y216 660 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 ZNF536O15090 1300 aa33.52■■■□□ 2.96
CBX4-202ENST00000448310 MYADML2A6NDP7 307 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 ADCY6O43306 1168 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 RANBP6O60518 1105 aaKnown RBP33.51■■■□□ 2.95
CBX4-202ENST00000448310 PQBP1O60828 265 aaKnown RBP33.51■■■□□ 2.95
CBX4-202ENST00000448310 ITGB8P26012 769 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 ACLYP53396 1101 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 SNAP25P60880 206 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 CNTN2Q02246 1040 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 ARMCX2Q7L311 632 aa33.51■■■□□ 2.95
CBX4-202ENST00000448310 CLTBP09497 229 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 FDX1P10109 184 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 KLHDC9Q8NEP7 349 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 TSEN34Q9BSV6 310 aaKnown RBP33.5■■■□□ 2.95
CBX4-202ENST00000448310 ACAD9Q9H845 621 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 HELLSQ9NRZ9 838 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 RNF146Q9NTX7 359 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 ANAPC4Q9UJX5 808 aa33.5■■■□□ 2.95
CBX4-202ENST00000448310 A0A0D9SFI3 127 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 DUSP11O75319 330 aaKnown RBP33.49■■■□□ 2.95
CBX4-202ENST00000448310 KCNA10Q16322 511 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 PPP4R3BQ5MIZ7 849 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 CCDC174Q6PII3 467 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 ABHD16BQ9H3Z7 469 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 STARD7Q9NQZ5 370 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 STXBP5LQ9Y2K9 1186 aa33.49■■■□□ 2.95
CBX4-202ENST00000448310 POTEB2H3BUK9 544 aa33.48■■■□□ 2.95
CBX4-202ENST00000448310 CCDC144BQ3MJ40 725 aa33.48■■■□□ 2.95
CBX4-202ENST00000448310 CCSAPQ6IQ19 270 aaPredicted RBP33.48■■■□□ 2.95
CBX4-202ENST00000448310 RCSD1Q6JBY9 416 aa33.48■■■□□ 2.95
CBX4-202ENST00000448310 CCDC144CPQ8IYA2 1237 aa33.48■■■□□ 2.95
CBX4-202ENST00000448310 A1CFQ9NQ94 594 aaKnown RBP33.48■■■□□ 2.95
CBX4-202ENST00000448310 ALAS1P13196 640 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 FAM133AQ8N9E0 248 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 FAM161BQ96MY7 647 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 LNPKQ9C0E8 428 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 TOMM22Q9NS69 142 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 PRR12Q9ULL5 1215 aa33.47■■■□□ 2.95
CBX4-202ENST00000448310 ORC4O43929 436 aa33.46■■■□□ 2.95
CBX4-202ENST00000448310 C6orf222P0C671 652 aaPredicted RBP33.46■■■□□ 2.95
CBX4-202ENST00000448310 ALX1Q15699 326 aa33.46■■■□□ 2.95
CBX4-202ENST00000448310 TRERF1Q96PN7 1200 aa33.46■■■□□ 2.95
CBX4-202ENST00000448310 KATNBL1Q9H079 304 aa33.46■■■□□ 2.95
CBX4-202ENST00000448310 MOXD2PA6NHM9 499 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 PLA2G6O60733 806 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 FGAP02671 866 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 MCMDC2Q4G0Z9 681 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 RRP12Q5JTH9 1297 aaKnown RBP33.45■■■□□ 2.95
CBX4-202ENST00000448310 NUP133Q8WUM0 1156 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 LCTP09848 1927 aa33.45■■■□□ 2.95
CBX4-202ENST00000448310 LRRC37A2A6NM11 1700 aa33.45■■■□□ 2.94
CBX4-202ENST00000448310 SOWAHBA6NEL2 793 aa33.44■■■□□ 2.94
CBX4-202ENST00000448310 KIAA0355O15063 1070 aa33.44■■■□□ 2.94
CBX4-202ENST00000448310 NMIQ13287 307 aaPredicted RBP33.44■■■□□ 2.94
CBX4-202ENST00000448310 CCDC96Q2M329 555 aa33.44■■■□□ 2.94
CBX4-202ENST00000448310 ZNF589Q86UQ0 364 aaPredicted RBP33.44■■■□□ 2.94
CBX4-202ENST00000448310 TMEM39AQ9NV64 488 aa33.44■■■□□ 2.94
CBX4-202ENST00000448310 DDX49Q9Y6V7 483 aaKnown RBP33.44■■■□□ 2.94
CBX4-202ENST00000448310 FGRP09769 529 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 RAG1P15918 1043 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 CST5P28325 142 aaPredicted RBP33.43■■■□□ 2.94
CBX4-202ENST00000448310 NOVP48745 357 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 FAAP100Q0VG06 881 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 TKFCQ3LXA3 575 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 MUM1L1Q5H9M0 696 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 FAM109BQ6ICB4 259 aaPredicted RBP33.43■■■□□ 2.94
CBX4-202ENST00000448310 YTHDC1Q96MU7 727 aaKnown RBP33.43■■■□□ 2.94
CBX4-202ENST00000448310 GUCD1Q96NT3 240 aa33.43■■■□□ 2.94
CBX4-202ENST00000448310 TRIM6-TRIM34B2RNG4 842 aa33.42■■■□□ 2.94
CBX4-202ENST00000448310 EPHB4P54760 987 aa33.42■■■□□ 2.94
CBX4-202ENST00000448310 ANKRD33Q7Z3H0 272 aa33.42■■■□□ 2.94
CBX4-202ENST00000448310 UPF3AQ9H1J1 476 aaKnown RBP33.42■■■□□ 2.94
CBX4-202ENST00000448310 SPC25Q9HBM1 224 aa33.42■■■□□ 2.94
CBX4-202ENST00000448310 C11orf97A0A1B0GVM6 126 aaPredicted RBP33.41■■■□□ 2.94
CBX4-202ENST00000448310 ASGR1P07306 291 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 HSPD1P10809 573 aaKnown RBP33.41■■■□□ 2.94
CBX4-202ENST00000448310 GJA9P57773 515 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 HAND2P61296 217 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 TTBK2Q6IQ55 1244 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 B4GALNT3Q6L9W6 998 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 GLT1D1Q96MS3 346 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 ASTN1O14525 1302 aa33.41■■■□□ 2.94
CBX4-202ENST00000448310 DCDC2CA8MYV0 355 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 SLC16A2P36021 539 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 PCSK9Q8NBP7 692 aaKnown RBP33.4■■■□□ 2.94
CBX4-202ENST00000448310 DCAF4Q8WV16 495 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 RILPL2Q969X0 211 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 TOX2Q96NM4 488 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 CCPG1Q9ULG6 757 aa33.4■■■□□ 2.94
CBX4-202ENST00000448310 GNASQ5JWF2 1037 aa33.39■■■□□ 2.94
CBX4-202ENST00000448310 ZNF697Q5TEC3 545 aa33.39■■■□□ 2.94
CBX4-202ENST00000448310 VTI1AQ96AJ9 217 aa33.39■■■□□ 2.94
CBX4-202ENST00000448310 TMEM47Q9BQJ4 181 aa33.39■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms