RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 RASIP1Q5U651 963 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 MCTP2Q6DN12 878 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 NEK8Q86SG6 692 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 RNF168Q8IYW5 571 aaPredicted RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 EXOC4Q96A65 974 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TMOD4Q9NZQ9 345 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 ADCY9O60503 1353 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 LRRD1A4D1F6 860 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TTC36A6NLP5 189 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 EVI5O60447 810 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 GAS7O60861 476 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 FGAP02671 866 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 SCRN1Q12765 414 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 RASEFQ8IZ41 740 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 CMTR1Q8N1G2 835 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 LRRC8CQ8TDW0 803 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TFCP2L1Q9NZI6 479 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TRPC6Q9Y210 931 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 NOP56O00567 594 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PPP6R2O75170 966 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 KRT19P08727 400 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 ATF2P15336 505 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PDE6AP16499 860 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PTGDRQ13258 359 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 RPS6KA2Q15349 733 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 PTPROQ16827 1216 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 HADHQ16836 314 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 DPCR1Q3MIW9 517 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TRAPPC3LQ5T215 181 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 BSPRYQ5W0U4 402 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 AP1ARQ63HQ0 302 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 SYMPKQ92797 1274 aaKnown RBP8.53□□□□□ -1.04
NEDD9-204ENST00000448183 TUBGCP2Q9BSJ2 902 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 OSBPL3Q9H4L5 887 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 MAGEF1Q9HAY2 307 aa8.53□□□□□ -1.04
NEDD9-204ENST00000448183 EEF1GP26641 437 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PEX19P40855 299 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 SESN3P58005 492 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PPP2R5CQ13362 524 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 ADAM9Q13443 819 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 NSMFQ6X4W1 530 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 ADAT2Q7Z6V5 191 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 RETREG2Q8NC44 543 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 TGFBRAP1Q8WUH2 860 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 TEKT1Q969V4 418 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 SLC39A2Q9NP94 309 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PANK4Q9NVE7 773 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 POLR3EQ9NVU0 708 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 BZW2Q9Y6E2 419 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PZPP20742 1482 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 ENC1O14682 589 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 ZYXQ15942 572 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PROCA1Q8NCQ7 364 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 DDX27Q96GQ7 796 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 AZI2Q9H6S1 392 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 EFCC1Q9HA90 598 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PTPRTO14522 1441 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 KCNA6P17658 529 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 IL9RQ01113 521 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 DBN1Q16643 649 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 TTC19Q6DKK2 380 aaPredicted RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 CPXCR1Q8N123 301 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 PNMA1Q8ND90 353 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 TBC1D22AQ8WUA7 517 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 CNOT6LQ96LI5 555 aaKnown RBP8.52□□□□□ -1.05
NEDD9-204ENST00000448183 TBX22Q9Y458 520 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 COL4A3BPQ9Y5P4 624 aa8.52□□□□□ -1.05
NEDD9-204ENST00000448183 HEXIM1O94992 359 aaKnown RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 P4HA1P13674 534 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 IFNAR2P48551 515 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 COG7P83436 770 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 SATB1Q01826 763 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 RASSF7Q02833 373 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 TCIRG1Q13488 830 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ADCK5Q3MIX3 580 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 C11orf57Q6ZUT1 292 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ARMC9Q7Z3E5 817 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ZNF526Q8TF50 670 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 HINFPQ9BQA5 517 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 TRIM6Q9C030 488 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 C1orf112Q9NSG2 853 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 GINS2Q9Y248 185 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ARHGEF10O15013 1369 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 KDRP35968 1356 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 PRPF6O94906 941 aaKnown RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ATF7P17544 494 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 PDE6CP51160 858 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 NAA35Q5VZE5 725 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 CAPN12Q6ZSI9 719 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 DNAJC10Q8IXB1 793 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 FAM178BQ8IXR5 827 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 BANK1Q8NDB2 785 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 HAUS1Q96CS2 278 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 CUEDC2Q9H467 287 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 ST7Q9NRC1 585 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 PICK1Q9NRD5 415 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 RCOR1Q9UKL0 485 aa8.51□□□□□ -1.05
NEDD9-204ENST00000448183 RNASELQ05823 741 aaKnown RBP8.51□□□□□ -1.05
NEDD9-204ENST00000448183 EXOC3L4Q17RC7 722 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms