RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 LRP2BPQ9P2M1 347 aa6.84□□□□□ -1.31
GTF3C3-205ENST00000448087 GPR55Q9Y2T6 319 aaPredicted RBP6.84□□□□□ -1.31
GTF3C3-205ENST00000448087 TBX1O43435 398 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 ENDOUP21128 410 aaKnown RBP6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 AMPD2Q01433 879 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 DUSP4Q13115 394 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 ZNF227Q86WZ6 799 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 TRIM59Q8IWR1 403 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 CRACR2BQ8N4Y2 399 aaPredicted RBP6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 FLAD1Q8NFF5 587 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 ST13P5Q8NFI4 369 aaPredicted RBP6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 FCRL2Q96LA5 508 aaPredicted RBP6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 MRGPRX3Q96LB0 322 aa6.83□□□□□ -1.32
GTF3C3-205ENST00000448087 STXBP3O00186 592 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 PDPK1O15530 556 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 ATG4DQ86TL0 474 aaPredicted RBP6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 PDZD8Q8NEN9 1154 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 MAP6Q96JE9 813 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 CCDC113Q9H0I3 377 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 ERVK13-1Q9NX77 482 aa6.82□□□□□ -1.32
GTF3C3-205ENST00000448087 AURKAO14965 403 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 HHIPL1Q96JK4 782 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 AGRPO00253 132 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 FGF10O15520 208 aaPredicted RBP6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 USP2O75604 605 aaPredicted RBP6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 HPXP02790 462 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 ITGB5P18084 799 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 RASGRF1Q13972 1273 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 RASA3Q14644 834 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 OXR1Q8N573 874 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 BTN2A2Q8WVV5 523 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 DEPDC7Q96QD5 511 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 OSBPL2Q9H1P3 480 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 C19orf44Q9H6X5 657 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 SP110Q9HB58 689 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 SNTG2Q9NY99 539 aa6.81□□□□□ -1.32
GTF3C3-205ENST00000448087 A0A1W2PQU0 124 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 FAM221BA6H8Z2 402 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 RAC2P15153 192 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 TRHRP34981 398 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 CEBPAP49715 358 aaPredicted RBP6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 FYB2Q5VWT5 728 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 RCSD1Q6JBY9 416 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 SPATC1Q76KD6 591 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 NAT16Q8N8M0 369 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 ANKS4BQ8N8V4 417 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 TMEM52Q8NDY8 209 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 LNPKQ9C0E8 428 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 BACE2Q9Y5Z0 518 aa6.8□□□□□ -1.32
GTF3C3-205ENST00000448087 FITM1A5D6W6 292 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 C2orf71A6NGG8 1288 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 BIN1O00499 593 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 PAPLNO95428 1278 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 TAL1P17542 331 aaPredicted RBP6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 KIR2DL1P43626 348 aaPredicted RBP6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 KIR2DL2P43627 348 aaPredicted RBP6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 AFMP43652 599 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 PPP2R2AP63151 447 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 CHRNEQ04844 493 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 MTERF2Q49AM1 385 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 TIGD5Q53EQ6 642 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 SPPL2CQ8IUH8 684 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 MYLIPQ8WY64 445 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 PTCHD1Q96NR3 888 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 SRPK1Q96SB4 655 aaKnown RBP6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 NKX2-4Q9H2Z4 354 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 USP35Q9P2H5 1018 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 TNFRSF10DQ9UBN6 386 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 FADS2P1A8MWK0 482 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 GRIA2P42262 883 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 SEPHS1P49903 392 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 NR0B2Q15466 257 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 EEF1DP3Q658K8 133 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 CEP128Q6ZU80 1094 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 LRP10Q7Z4F1 713 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 MKL1Q969V6 931 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 CYP26B1Q9NR63 512 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 PFDN2Q9UHV9 154 aa6.79□□□□□ -1.32
GTF3C3-205ENST00000448087 IQCA1LA6NCM1 817 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 NOTOA8MTQ0 251 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 CAPNS1P04632 268 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 SCRN1Q12765 414 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 CYP2R1Q6VVX0 501 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 ABHD4Q8TB40 342 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 COPS5Q92905 334 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 ZNF669Q96BR6 464 aaPredicted RBP6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 SGSM3Q96HU1 749 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 KIRREL1Q96J84 757 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 GPRC5CQ9NQ84 441 aa6.78□□□□□ -1.32
GTF3C3-205ENST00000448087 RTP1P59025 263 aa6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 CYP4F3Q08477 520 aa6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 BMS1Q14692 1282 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 SF1Q15637 639 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 SLC14A2Q15849 920 aa6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 LRRC47Q8N1G4 583 aaKnown RBP6.77□□□□□ -1.33
GTF3C3-205ENST00000448087 PSPNO60542 156 aa6.76□□□□□ -1.33
GTF3C3-205ENST00000448087 DIAPH1O60610 1272 aaKnown RBP6.76□□□□□ -1.33
GTF3C3-205ENST00000448087 EFEMP2O95967 443 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms