RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 NEDD1Q8NHV4 660 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 LENG1Q96BZ8 264 aaPredicted RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 FAM161BQ96MY7 647 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 NAPBQ9H115 298 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ZHX1Q9UKY1 873 aaPredicted RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ISY1Q9ULR0 285 aaKnown RBP12.31□□□□□ -0.44
VSTM1-206ENST00000447872 ZNF236Q9UL36 1845 aa12.31□□□□□ -0.44
VSTM1-206ENST00000447872 TMEM265A0A087WTH1 108 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 KIAA0355O15063 1070 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
VSTM1-206ENST00000447872 RAG1P15918 1043 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 PPARAQ07869 468 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 ACVR2BQ13705 512 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 KCNA10Q16322 511 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 PPP4R3BQ5MIZ7 849 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 C9orf50Q5SZB4 431 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 CHD1LQ86WJ1 897 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 CHURC1Q8WUH1 139 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 SEC62Q99442 399 aaKnown RBP12.3□□□□□ -0.44
VSTM1-206ENST00000447872 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 TMEM39AQ9NV64 488 aa12.3□□□□□ -0.44
VSTM1-206ENST00000447872 A0A0G2JMZ2 1700 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 TMEM232C9JQI7 657 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 ADAMTS4O75173 837 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 MX1P20591 662 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 STAT2P52630 851 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 SMAD3P84022 425 aaKnown RBP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 IKQ13123 557 aaPredicted RBP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 ZMYM1Q5SVZ6 1142 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 FAM160B2Q86V87 743 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 PCSK9Q8NBP7 692 aaKnown RBP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 KLHDC9Q8NEP7 349 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 OTUD7AQ8TE49 926 aaPredicted RBP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 VTI1AQ96AJ9 217 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 TOX2Q96NM4 488 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 GUCD1Q96NT3 240 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 ABHD16BQ9H3Z7 469 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 STARD7Q9NQZ5 370 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 HOMER2Q9NSB8 354 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.29□□□□□ -0.44
VSTM1-206ENST00000447872 SYNRGQ9UMZ2 1314 aa12.29□□□□□ -0.44
VSTM1-206ENST00000447872 C6orf222P0C671 652 aaPredicted RBP12.28□□□□□ -0.44
VSTM1-206ENST00000447872 KCNA4P22459 653 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 MCCP23508 829 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 ITGB8P26012 769 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 SLC1A4P43007 532 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 FAAP100Q0VG06 881 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 CCDC144BQ3MJ40 725 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 STAG1Q8WVM7 1258 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 GMCL1Q96IK5 515 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 RNPC3Q96LT9 517 aaKnown RBP12.28□□□□□ -0.44
VSTM1-206ENST00000447872 GLT1D1Q96MS3 346 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 TBC1D32Q96NH3 1257 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 SEMA6BQ9H3T3 888 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 UPF2Q9HAU5 1272 aaKnown RBP12.28□□□□□ -0.44
VSTM1-206ENST00000447872 RLFQ13129 1914 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 ELP1O95163 1332 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 DNAH12Q6ZR08 3092 aa12.28□□□□□ -0.44
VSTM1-206ENST00000447872 LAMA2P24043 3122 aaKnown RBP12.28□□□□□ -0.44
VSTM1-206ENST00000447872 TSPY2A6NKD2 308 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 CST5P28325 142 aaPredicted RBP12.27□□□□□ -0.45
VSTM1-206ENST00000447872 FPGSQ05932 587 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 TKFCQ3LXA3 575 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 GNASQ5JWF2 1037 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 CCSAPQ6IQ19 270 aaPredicted RBP12.27□□□□□ -0.45
VSTM1-206ENST00000447872 NOL8Q76FK4 1167 aaKnown RBP12.27□□□□□ -0.45
VSTM1-206ENST00000447872 ARMCX2Q7L311 632 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 CCDC144CPQ8IYA2 1237 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 CHMP4CQ96CF2 233 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 CDX2Q99626 313 aaPredicted RBP12.27□□□□□ -0.45
VSTM1-206ENST00000447872 LNPKQ9C0E8 428 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 ACAD9Q9H845 621 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 STX8Q9UNK0 236 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 PLIN4Q96Q06 1357 aa12.27□□□□□ -0.45
VSTM1-206ENST00000447872 PIEZO1Q92508 2521 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 PLA2G6O60733 806 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 ASGR1P07306 291 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 EPHB4P54760 987 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 GJA9P57773 515 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 CNTN2Q02246 1040 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 RCSD1Q6JBY9 416 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 FGD4Q96M96 766 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 AGBL1Q96MI9 1066 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 TRERF1Q96PN7 1200 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 UPF3AQ9H1J1 476 aaKnown RBP12.26□□□□□ -0.45
VSTM1-206ENST00000447872 RNF146Q9NTX7 359 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 MROH7Q68CQ1 1323 aa12.26□□□□□ -0.45
VSTM1-206ENST00000447872 MYADML2A6NDP7 307 aa12.25□□□□□ -0.45
VSTM1-206ENST00000447872 ASB14A6NK59 587 aa12.25□□□□□ -0.45
VSTM1-206ENST00000447872 RANBP6O60518 1105 aaKnown RBP12.25□□□□□ -0.45
VSTM1-206ENST00000447872 TIMP1P01033 207 aa12.25□□□□□ -0.45
VSTM1-206ENST00000447872 ALAS1P13196 640 aa12.25□□□□□ -0.45
VSTM1-206ENST00000447872 CDK7P50613 346 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms