RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 BZW1Q7L1Q6 419 aaKnown RBP21.36■■□□□ 1.01
HMGA1-205ENST00000447654 MED15Q96RN5 788 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 MAP3K14Q99558 947 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 KDM4CQ9H3R0 1056 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 GUCA1BQ9UMX6 200 aa21.36■■□□□ 1.01
HMGA1-205ENST00000447654 FRMD3A2A2Y4 597 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 ZMYND10O75800 440 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 SMNDC1O75940 238 aaKnown RBP eCLIP21.35■■□□□ 1.01
HMGA1-205ENST00000447654 ATP6V1G2O95670 118 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 IFIT1P09914 478 aaKnown RBP21.35■■□□□ 1.01
HMGA1-205ENST00000447654 KRT83P78385 493 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 WASHC4Q2M389 1173 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 APLFQ8IW19 511 aaPredicted RBP21.35■■□□□ 1.01
HMGA1-205ENST00000447654 IQCKQ8N0W5 287 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 MARCH10Q8NA82 808 aaPredicted RBP21.35■■□□□ 1.01
HMGA1-205ENST00000447654 TRIM58Q8NG06 486 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 SLF1Q9BQI6 1058 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 HAUS2Q9NVX0 235 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 C15orf41Q9Y2V0 281 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 NUP98P52948 1817 aa21.35■■□□□ 1.01
HMGA1-205ENST00000447654 C5orf60A6NFR6 353 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 KRT86O43790 486 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 PRLRP16471 622 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 KCNB1Q14721 858 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 TTC39AQ5SRH9 613 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 PI16Q6UXB8 463 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 MFN1Q8IWA4 741 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 MYH8P13535 1937 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 A0A0G2JS52 829 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 LRRC10BA6NIK2 292 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 NUTM2BA6NNL0 878 aaPredicted RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 NUTM2EB1AL46 878 aaPredicted RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 SCTRP47872 440 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 IFIT5Q13325 482 aaKnown RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 TRMT44Q8IYL2 757 aaKnown RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 PARD3BQ8TEW8 1205 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 RRP36Q96EU6 259 aaKnown RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 MOV10L1Q9BXT6 1211 aaKnown RBP21.34■■□□□ 1.01
HMGA1-205ENST00000447654 OSBPL7Q9BZF2 842 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 NOD2Q9HC29 1040 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 SLC39A2Q9NP94 309 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 HDAC6Q9UBN7 1215 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 RIC1Q4ADV7 1423 aa21.34■■□□□ 1.01
HMGA1-205ENST00000447654 ITGA6P23229 1130 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 ATP1A2P50993 1020 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 OTUD7BQ6GQQ9 843 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 ZIM3Q96PE6 472 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 RIPOR2Q9Y4F9 1068 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 NRAPQ86VF7 1730 aa21.33■■□□□ 1.01
HMGA1-205ENST00000447654 E7EWF7 191 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 DNM1LO00429 736 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 BUB1BO60566 1050 aaPredicted RBP21.33■■□□□ 1
HMGA1-205ENST00000447654 RPSAP08865 295 aaKnown RBP21.33■■□□□ 1
HMGA1-205ENST00000447654 GUCY1A3Q02108 690 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 FKBP4Q02790 459 aaKnown RBP eCLIP21.33■■□□□ 1
HMGA1-205ENST00000447654 SPAG1Q07617 926 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 DDB1Q16531 1140 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 ZMYM1Q5SVZ6 1142 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 DZIP3Q86Y13 1208 aaKnown RBP21.33■■□□□ 1
HMGA1-205ENST00000447654 KRI1Q8N9T8 703 aaKnown RBP21.33■■□□□ 1
HMGA1-205ENST00000447654 NSMCE1Q8WV22 266 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 ATP6V1G3Q96LB4 118 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 HELLSQ9NRZ9 838 aa21.33■■□□□ 1
HMGA1-205ENST00000447654 REXO2Q9Y3B8 237 aaKnown RBP21.33■■□□□ 1
HMGA1-205ENST00000447654 PPP1R12BO60237 982 aaPredicted RBP21.32■■□□□ 1
HMGA1-205ENST00000447654 AP1G2O75843 785 aa21.32■■□□□ 1
HMGA1-205ENST00000447654 CFAP58Q5T655 872 aa21.32■■□□□ 1
HMGA1-205ENST00000447654 INTS5Q6P9B9 1019 aaKnown RBP21.32■■□□□ 1
HMGA1-205ENST00000447654 TSEN2Q8NCE0 465 aaKnown RBP21.32■■□□□ 1
HMGA1-205ENST00000447654 SPDYE1Q8NFV5 336 aaPredicted RBP21.32■■□□□ 1
HMGA1-205ENST00000447654 ANKRD27Q96NW4 1050 aa21.32■■□□□ 1
HMGA1-205ENST00000447654 SYNRGQ9UMZ2 1314 aa21.32■■□□□ 1
HMGA1-205ENST00000447654 GMNCA6NCL1 334 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 IRS4O14654 1257 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 ENC1O14682 589 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 GSTA1P08263 222 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 CTSWP56202 376 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 IRAK4Q9NWZ3 460 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 STIM2Q9P246 746 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 LIMA1Q9UHB6 759 aaKnown RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 TRMT112Q9UI30 125 aaKnown RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 MAST3O60307 1309 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 ANKRD36CQ5JPF3 1778 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 E7EVH7 732 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 M0R2C6 588 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 SKAP2O75563 359 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 RTN3O95197 1032 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 LUC7L3O95232 432 aaKnown RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 IL6STP40189 918 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 VAV2P52735 878 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 ELF3P78545 371 aaPredicted RBP21.31■■□□□ 1
HMGA1-205ENST00000447654 CCDC122Q5T0U0 273 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 MSL1Q68DK7 614 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 CAPZA3Q96KX2 299 aa21.31■■□□□ 1
HMGA1-205ENST00000447654 MKRN4PQ13434 485 aaPredicted RBP21.3■■□□□ 1
HMGA1-205ENST00000447654 CCDC38Q502W7 563 aa21.3■■□□□ 1
HMGA1-205ENST00000447654 ZNF579Q8NAF0 562 aaKnown RBP21.3■■□□□ 1
HMGA1-205ENST00000447654 OSBP2Q969R2 916 aa21.3■■□□□ 1
HMGA1-205ENST00000447654 ZBTB10Q96DT7 871 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms