RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 AURKAO14965 403 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 VAMP4O75379 141 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 KCNH1O95259 989 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 IFNGR1P15260 489 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 MTERF2Q49AM1 385 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 RALGPS1Q5JS13 557 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 ABI1Q8IZP0 508 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 CRACR2BQ8N4Y2 399 aaPredicted RBP6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 LINC01599Q8WXQ3 324 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 ALPK1Q96QP1 1244 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 DNAJC7Q99615 494 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 SPATA9Q9BWV2 254 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 PRDM7Q9NQW5 492 aa6.59□□□□□ -1.35
HMGB1P48-201ENST00000446155 NOP56O00567 594 aaKnown RBP6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 SCG5P05408 212 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 CD3EP07766 207 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 ZGLP1P0C6A0 271 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 GP2P55259 537 aaKnown RBP6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 PPP2R2AP63151 447 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 AMPD2Q01433 879 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 CWF19L1Q69YN2 538 aaKnown RBP6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 RCSD1Q6JBY9 416 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 ZPBP2Q6X784 338 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 CBLL1Q75N03 491 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 Q8N3U1 123 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 BTN2A2Q8WVV5 523 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 NKX2-4Q9H2Z4 354 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 SP110Q9HB58 689 aa6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
HMGB1P48-201ENST00000446155 AGRPO00253 132 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 FGF10O15520 208 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 SMARCA5O60264 1052 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 FKTNO75072 461 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 RNASE1P07998 156 aaKnown RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 ENDOUP21128 410 aaKnown RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 GRIA2P42262 883 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 SSRP1Q08945 709 aaKnown RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 IFRD2Q12894 506 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 PLCL1Q15111 1095 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 ZNF792Q3KQV3 632 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 TP53INP2Q8IXH6 220 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 LRRC47Q8N1G4 583 aaKnown RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 COPS5Q92905 334 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 C1orf159Q96HA4 380 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 MRFAP1L1Q96HT8 127 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 FCRL2Q96LA5 508 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 ADAMTS10Q9H324 1103 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 CYP26B1Q9NR63 512 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 AP5S1Q9NUS5 200 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 ERVK13-1Q9NX77 482 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 SLAMF8Q9P0V8 285 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 PFDN2Q9UHV9 154 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 TMEM59LQ9UK28 342 aa6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 GPR55Q9Y2T6 319 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P48-201ENST00000446155 STXBP3O00186 592 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 NOP2P46087 812 aaKnown RBP6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 GFRA1P56159 465 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 LONRF2Q1L5Z9 754 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 DPY19L1Q2PZI1 675 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 WAPLQ7Z5K2 1190 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 ZBTB38Q8NAP3 1195 aaPredicted RBP6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 KREMEN2Q8NCW0 462 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 TMEM52Q8NDY8 209 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 PI4K2BQ8TCG2 481 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 PPP1R14AQ96A00 147 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 MAP6Q96JE9 813 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 LRP2BPQ9P2M1 347 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 BACE2Q9Y5Z0 518 aa6.56□□□□□ -1.36
HMGB1P48-201ENST00000446155 KDM2BQ8NHM5 1336 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 GSTM1P09488 218 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 FAM153BP0C7A2 387 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 FGFR1P11362 822 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 RPL10P27635 214 aaKnown RBP6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 HOXC12P31275 282 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 HSP90AA2PQ14568 343 aaPredicted RBP6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 TESK1Q15569 626 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 SF1Q15637 639 aaKnown RBP6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 SLC35F1Q5T1Q4 408 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 FOXB2Q5VYV0 432 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 NOP9Q86U38 636 aaKnown RBP6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 NPLOC4Q8TAT6 608 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 OSBP2Q969R2 916 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 HHIPL1Q96JK4 782 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 AARSD1Q9BTE6 412 aaKnown RBP6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 ADGRE2Q9UHX3 823 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 CTNND2Q9UQB3 1225 aa6.55□□□□□ -1.36
HMGB1P48-201ENST00000446155 SSU72P8A0A1W2PR75 194 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 C2orf71A6NGG8 1288 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 NOTOA8MTQ0 251 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 GDNFP39905 211 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 SCRN1Q12765 414 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 C2orf27AQ580R0 203 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 YOD1Q5VVQ6 348 aaPredicted RBP6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 EEF1DP3Q658K8 133 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 DENND5AQ6IQ26 1287 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 JAZF1Q86VZ6 243 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 FLAD1Q8NFF5 587 aa6.54□□□□□ -1.36
HMGB1P48-201ENST00000446155 THAP3Q8WTV1 239 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms