RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 DHX58Q96C10 678 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 MAN1B1Q9UKM7 699 aa21.44■■□□□ 1.02
SEMA3D-202ENST00000444867 MMP14P50281 582 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 ADCY7P51828 1080 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 ICA1Q05084 483 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 DTHD1Q6ZMT9 781 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 IQUBQ8NA54 791 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 MLKLQ8NB16 471 aa21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 ZNF70Q9UC06 446 aaPredicted RBP21.43■■□□□ 1.02
SEMA3D-202ENST00000444867 A0A087X0B3 334 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 FAM196BA6NMK8 535 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 FOXN1O15353 648 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 NCAPHQ15003 741 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 IL17AQ16552 155 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 SPDYE2Q495Y8 402 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 DALRD3Q5D0E6 543 aaKnown RBP21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 CT47A1Q5JQC4 288 aaPredicted RBP21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 RBM26Q5T8P6 1007 aaKnown RBP21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 NEK8Q86SG6 692 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 DRC7Q8IY82 874 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 SPC24Q8NBT2 197 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 GMCL1P1Q8NEA9 526 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 CSRNP1Q96S65 589 aa21.42■■□□□ 1.02
SEMA3D-202ENST00000444867 ZBTB5O15062 677 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 PRR29P0C7W0 189 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 MYL5Q02045 173 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 MORC3Q14149 939 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 SEPT2Q15019 361 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 SLFN13Q68D06 897 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 GLT8D2Q9H1C3 349 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 RIC8AQ9NPQ8 531 aa21.41■■□□□ 1.02
SEMA3D-202ENST00000444867 SLURP2P0DP57 97 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 E2F4Q16254 413 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 TTBK2Q6IQ55 1244 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 PAGE5Q96GU1 130 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 SLC1A4P43007 532 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 ISM2Q6H9L7 571 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 KCTD1Q719H9 257 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 SIAH1Q8IUQ4 282 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 COA7Q96BR5 231 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 GMCL1Q96IK5 515 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 AK8Q96MA6 479 aa21.4■■□□□ 1.02
SEMA3D-202ENST00000444867 PTGER2P43116 358 aa21.39■■□□□ 1.01
SEMA3D-202ENST00000444867 GSDMAQ96QA5 445 aa21.39■■□□□ 1.01
SEMA3D-202ENST00000444867 TAOK3Q9H2K8 898 aa21.39■■□□□ 1.01
SEMA3D-202ENST00000444867 TMEM60Q9H2L4 133 aa21.39■■□□□ 1.01
SEMA3D-202ENST00000444867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.39■■□□□ 1.01
SEMA3D-202ENST00000444867 CNTNAP1P78357 1384 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 TCP10L2B9ZVM9 353 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 USP17L10C9JJH3 530 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 NEMFO60524 1076 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 OR52Z1P0C646 297 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 MRPL12P52815 198 aaKnown RBP21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 FAM83AQ86UY5 434 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 TBCKQ8TEA7 893 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 CUL5Q93034 780 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 CCSER1Q9C0I3 900 aa21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 TTC12Q9H892 705 aaPredicted RBP21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 BIN2Q9UBW5 565 aaPredicted RBP21.38■■□□□ 1.01
SEMA3D-202ENST00000444867 CCNT1O60563 726 aaKnown RBP21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 GDF11O95390 407 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 BMP6P22004 513 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 CXCL9Q07325 125 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 DPYDQ12882 1025 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 LETM2Q2VYF4 491 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 JAKMIP3Q5VZ66 844 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 CIAPIN1Q6FI81 312 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 PDXDC2PQ6P474 469 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 GRAMD1CQ8IYS0 662 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 ZBED3Q96IU2 234 aaPredicted RBP21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 ZBTB12Q9Y330 459 aaPredicted RBP21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 CLRN2A0PK11 232 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 F5H6K3 240 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 TBC1D12O60347 775 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 PPP1R11O60927 126 aaPredicted RBP21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 GH2P01242 217 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 SLC16A2P36021 539 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 KLRC3Q07444 240 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 JDP2Q8WYK2 163 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 SGIP1Q9BQI5 828 aa21.37■■□□□ 1.01
SEMA3D-202ENST00000444867 GTPBP6O43824 516 aaPredicted RBP21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 AFMP43652 599 aa21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 CLK2P49760 499 aaKnown RBP21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 TNIP1Q15025 636 aa21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 SHROOM1Q2M3G4 852 aaPredicted RBP21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 CCDC186Q7Z3E2 898 aa21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 ZNF830Q96NB3 372 aaPredicted RBP21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 PPP1R1BQ9UD71 204 aaPredicted RBP21.36■■□□□ 1.01
SEMA3D-202ENST00000444867 ERCC5P28715 1186 aaPredicted RBP21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 UBA7P41226 1012 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 MCTP2Q6DN12 878 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 ENOX1Q8TC92 643 aaKnown RBP21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 NAP1L4Q99733 375 aaKnown RBP21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 CUEDC2Q9H467 287 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 ARHGEF10LQ9HCE6 1279 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 DISC1Q9NRI5 854 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 TMEM260Q9NX78 707 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 CD2APQ9Y5K6 639 aa21.35■■□□□ 1.01
SEMA3D-202ENST00000444867 NDUFB10O96000 172 aa21.34■■□□□ 1.01
SEMA3D-202ENST00000444867 MYL1P05976 194 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms