RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 ORC4O43929 436 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 ACVR2BQ13705 512 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 ALX1Q15699 326 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 RCSD1Q6JBY9 416 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 DCAF4Q8WV16 495 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 LENG1Q96BZ8 264 aaPredicted RBP13.91□□□□□ -0.18
TTC28-203ENST00000442232 LNPKQ9C0E8 428 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 ABHD16BQ9H3Z7 469 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 STARD7Q9NQZ5 370 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 PDLIM7Q9NR12 457 aa13.91□□□□□ -0.18
TTC28-203ENST00000442232 ZMYM6O95789 1325 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 A0A0D9SFI3 127 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 MOXD2PA6NHM9 499 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 PLA2G6O60733 806 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 PQBP1O60828 265 aaKnown RBP13.9□□□□□ -0.18
TTC28-203ENST00000442232 DUSP11O75319 330 aaKnown RBP13.9□□□□□ -0.18
TTC28-203ENST00000442232 CLTBP09497 229 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 ALAS1P13196 640 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 TLE2Q04725 743 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
TTC28-203ENST00000442232 CCDC174Q6PII3 467 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 ARMCX2Q7L311 632 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 PCSK9Q8NBP7 692 aaKnown RBP13.9□□□□□ -0.18
TTC28-203ENST00000442232 FAM227BQ96M60 508 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 TRERF1Q96PN7 1200 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 TACC3Q9Y6A5 838 aa13.9□□□□□ -0.18
TTC28-203ENST00000442232 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.19
TTC28-203ENST00000442232 ASB14A6NK59 587 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 DCDC2CA8MYV0 355 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 FOXP2O15409 715 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 NMT2O60551 498 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 ADAMTS4O75173 837 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 SNAI1O95863 264 aaPredicted RBP13.89□□□□□ -0.19
TTC28-203ENST00000442232 C6orf222P0C671 652 aaPredicted RBP13.89□□□□□ -0.19
TTC28-203ENST00000442232 ACLYP53396 1101 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 B4GALNT3Q6L9W6 998 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 NOL8Q76FK4 1167 aaKnown RBP13.89□□□□□ -0.19
TTC28-203ENST00000442232 CCDC144CPQ8IYA2 1237 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 BADQ92934 168 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 VTI1AQ96AJ9 217 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 AGBL1Q96MI9 1066 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 GLT1D1Q96MS3 346 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
TTC28-203ENST00000442232 CCPG1Q9ULG6 757 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 PRR12Q9ULL5 1215 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 LAMA4Q16363 1823 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 MROH7Q68CQ1 1323 aa13.89□□□□□ -0.19
TTC28-203ENST00000442232 LRRC37A2A6NM11 1700 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 FGAP02671 866 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 HSPD1P10809 573 aaKnown RBP13.88□□□□□ -0.19
TTC28-203ENST00000442232 TOP1P11387 765 aaKnown RBP13.88□□□□□ -0.19
TTC28-203ENST00000442232 PCP11498 1178 aaKnown RBP13.88□□□□□ -0.19
TTC28-203ENST00000442232 RAG1P15918 1043 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 CNTN2Q02246 1040 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 KCNA10Q16322 511 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 CCDC144BQ3MJ40 725 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 Q7L0L9 218 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 SLC17A8Q8NDX2 589 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 A1CFQ9NQ94 594 aaKnown RBP13.88□□□□□ -0.19
TTC28-203ENST00000442232 INCENPQ9NQS7 918 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 IL17RBQ9NRM6 502 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 DIAPH3Q9NSV4 1193 aa13.88□□□□□ -0.19
TTC28-203ENST00000442232 TRIM43BA6NCK2 446 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 HIP1O00291 1037 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 CST5P28325 142 aaPredicted RBP13.87□□□□□ -0.19
TTC28-203ENST00000442232 HAND2P61296 217 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 NSMFQ6X4W1 530 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 MFSD6Q6ZSS7 791 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 SMC5Q8IY18 1101 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 KLHDC9Q8NEP7 349 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 TRIM43Q96BQ3 446 aaPredicted RBP13.87□□□□□ -0.19
TTC28-203ENST00000442232 TMEM39AQ9NV64 488 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 PNMA2Q9UL42 364 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 ZNF536O15090 1300 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 ELP1O95163 1332 aa13.87□□□□□ -0.19
TTC28-203ENST00000442232 A0A0U1RQG5 324 aaPredicted RBP13.86□□□□□ -0.19
TTC28-203ENST00000442232 TLR3O15455 904 aaKnown RBP13.86□□□□□ -0.19
TTC28-203ENST00000442232 ICAM1P05362 532 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 FGRP09769 529 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 GJA9P57773 515 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 SNAP25P60880 206 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 TNFAIP2Q03169 654 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 FPGSQ05932 587 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 GNASQ5JWF2 1037 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 ZNF697Q5TEC3 545 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 SYDE2Q5VT97 1194 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 SH3RF1Q7Z6J0 888 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 ZNF589Q86UQ0 364 aaPredicted RBP13.86□□□□□ -0.19
TTC28-203ENST00000442232 FAM133AQ8N9E0 248 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 ESR2Q92731 530 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 FGD4Q96M96 766 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 TOX2Q96NM4 488 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 TMEM47Q9BQJ4 181 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 AP5M1Q9H0R1 490 aa13.86□□□□□ -0.19
TTC28-203ENST00000442232 UPF3AQ9H1J1 476 aaKnown RBP13.86□□□□□ -0.19
TTC28-203ENST00000442232 GPCPD1Q9NPB8 672 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms