RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 OR52Z1P0C646 297 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 UBA7P41226 1012 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 INF2Q27J81 1249 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 ARHGAP27Q6ZUM4 889 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 CSRNP2Q9H175 543 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 DNAJC25Q9H1X3 360 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 DNAJC18Q9H819 358 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 MAGEF1Q9HAY2 307 aa6.84□□□□□ -1.31
VPS50-205ENST00000441602 VWA3AA6NCI4 1184 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 NEMFO60524 1076 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 NDUFB10O96000 172 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 MSNP26038 577 aaKnown RBP6.84□□□□□ -1.32
VPS50-205ENST00000441602 LMOD1P29536 600 aaPredicted RBP6.84□□□□□ -1.32
VPS50-205ENST00000441602 AP3B2Q13367 1082 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 CDC37Q16543 378 aaPredicted RBP6.84□□□□□ -1.32
VPS50-205ENST00000441602 KIF4BQ2VIQ3 1234 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 CT47A1Q5JQC4 288 aaPredicted RBP6.84□□□□□ -1.32
VPS50-205ENST00000441602 KCTD1Q719H9 257 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 MICALL2Q8IY33 904 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 ZBED3Q96IU2 234 aaPredicted RBP6.84□□□□□ -1.32
VPS50-205ENST00000441602 CUEDC2Q9H467 287 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 AS3MTQ9HBK9 375 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 RMND1Q9NWS8 449 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 STK24Q9Y6E0 443 aa6.84□□□□□ -1.32
VPS50-205ENST00000441602 TMEM232C9JQI7 657 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 POLR2DO15514 142 aaKnown RBP6.83□□□□□ -1.32
VPS50-205ENST00000441602 LMNB1P20700 586 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 POSTNQ15063 836 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 NPY5RQ15761 445 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 LETM2Q2VYF4 491 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 JAKMIP3Q5VZ66 844 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 DRC7Q8IY82 874 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 CALML4Q96GE6 196 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 SGIP1Q9BQI5 828 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 BPIFA3Q9BQP9 254 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 ZNF341Q9BYN7 854 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 LRRC27Q9C0I9 530 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 PSTPIP2Q9H939 334 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 CNOT7Q9UIV1 285 aaKnown RBP6.83□□□□□ -1.32
VPS50-205ENST00000441602 TMX2Q9Y320 296 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 PPP2R3BQ9Y5P8 575 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 FAM205CA6NFA0 338 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 USP17L10C9JJH3 530 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 FZD9O00144 591 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 WNT10BO00744 389 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 NRDCO43847 1150 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 ADCY5O95622 1261 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 SLFN14P0C7P3 912 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 SEMA3FQ13275 785 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 RASA3Q14644 834 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 QRICH1Q2TAL8 776 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 BTNL9Q6UXG8 535 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 ARHGAP30Q7Z6I6 1101 aaPredicted RBP6.83□□□□□ -1.32
VPS50-205ENST00000441602 CLEC10AQ8IUN9 316 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 MLKLQ8NB16 471 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 DHX58Q96C10 678 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 MTMR8Q96EF0 704 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 CDK5RAP3Q96JB5 506 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 TRIM5Q9C035 493 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 SERTAD1Q9UHV2 236 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 PCDHA1Q9Y5I3 950 aa6.83□□□□□ -1.32
VPS50-205ENST00000441602 CBFA2T2O43439 604 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SLC26A4O43511 780 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 HOXA7P31268 230 aaPredicted RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 CAP2P40123 477 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 STAT6P42226 847 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 STAT2P52630 851 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 USP14P54578 494 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 RASSF7Q02833 373 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 RRAGBQ5VZM2 374 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 RASGRP4Q8TDF6 673 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SYMPKQ92797 1274 aaKnown RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 COA7Q96BR5 231 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 PDLIM2Q96JY6 352 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 CPVLQ9H3G5 476 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 VCPKMTQ9H867 229 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 BIN2Q9UBW5 565 aaPredicted RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 TUBE1Q9UJT0 475 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 FEM1BQ9UK73 627 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 MRPL11Q9Y3B7 192 aaKnown RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 CNTNAP1P78357 1384 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SPDYE3A6NKU9 549 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 CCNT1O60563 726 aaKnown RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 PLA2G6O60733 806 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 MYL1P05976 194 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SLC16A2P36021 539 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 AMPD3Q01432 767 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 TTBK2Q6IQ55 1244 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 FAM43AQ8N2R8 423 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 PDILTQ8N807 584 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 TBCKQ8TEA7 893 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 TMEM39BQ9GZU3 492 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 ADAMTSL1Q8N6G6 1762 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 GTPBP6O43824 516 aaPredicted RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 CTNND1O60716 968 aaKnown RBP6.82□□□□□ -1.32
VPS50-205ENST00000441602 FDX1P10109 184 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 PTGER2P43116 358 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 CALCRLQ16602 461 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SLC35G1Q2M3R5 365 aa6.82□□□□□ -1.32
VPS50-205ENST00000441602 SUPT20HL1Q3ZLR7 823 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms