RNA–Protein interactions for RNA: ENST00000441517.6

SCAP-207, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,748 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-207ENST00000441517 GGA1Q9UJY5 639 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 FAM205AQ6ZU69 1335 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 TTC26A0AVF1 554 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 DDX39AO00148 427 aaKnown RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 BMP15O95972 392 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 REXO1L1PQ8IX06 675 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 JAKMIP2Q96AA8 810 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 GTPBP4Q9BZE4 634 aaKnown RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 USP21Q9UK80 565 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 FER1L4A9Z1Z3 1794 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 XRN1Q8IZH2 1706 aaKnown RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 RBM26Q5T8P6 1007 aaKnown RBP16.82■□□□□ 0.28
SCAP-207ENST00000441517 CYP26C1Q6V0L0 522 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 SV2BQ7L1I2 683 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
SCAP-207ENST00000441517 SP4Q02446 784 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 CALCRLQ16602 461 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 TCEAL9Q9UHQ7 104 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 DUSP10Q9Y6W6 482 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 ST5P78524 1137 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 SPAG1Q07617 926 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 OR8K1Q8NGG5 319 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 CEP95Q96GE4 821 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 RIOK1Q9BRS2 568 aaKnown RBP16.81■□□□□ 0.28
SCAP-207ENST00000441517 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
SCAP-207ENST00000441517 SFI1A8K8P3 1242 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 ZNF185O15231 689 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 LONRF2Q1L5Z9 754 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 TTBK2Q6IQ55 1244 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 ADAT2Q7Z6V5 191 aaKnown RBP16.81■□□□□ 0.28
SCAP-207ENST00000441517 USP40Q9NVE5 1235 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 ARPP21Q9UBL0 812 aaPredicted RBP16.81■□□□□ 0.28
SCAP-207ENST00000441517 RFX7Q2KHR2 1363 aa16.81■□□□□ 0.28
SCAP-207ENST00000441517 USP17L15C9J2P7 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L13C9JLJ4 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L11C9JVI0 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L18D6R9N7 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L22D6RA61 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L17D6RBQ6 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L19D6RCP7 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L20D6RJB6 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 SORBS3O60504 671 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 GNAQP50148 359 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L24Q0WX57 530 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 ZFYVE27Q5T4F4 411 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 USP17L6PQ6QN14 398 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 TMC4Q7Z404 712 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 ADGRG1Q9Y653 693 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 FAM208AQ9UK61 1670 aaKnown RBP16.8■□□□□ 0.28
SCAP-207ENST00000441517 GTPBP6O43824 516 aaPredicted RBP16.8■□□□□ 0.28
SCAP-207ENST00000441517 EIF3JO75822 258 aaKnown RBP16.8■□□□□ 0.28
SCAP-207ENST00000441517 TRIM37O94972 964 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 GDF11O95390 407 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 TDP2O95551 362 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 GNA11P29992 359 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 ALX1Q15699 326 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 WDR66Q8TBY9 1149 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 CNOT6LQ96LI5 555 aaKnown RBP16.8■□□□□ 0.28
SCAP-207ENST00000441517 SPAG5Q96R06 1193 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 CYLC1P35663 651 aaPredicted RBP16.8■□□□□ 0.28
SCAP-207ENST00000441517 CDK8P49336 464 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 POTEDQ86YR6 584 aa16.8■□□□□ 0.28
SCAP-207ENST00000441517 KRT86O43790 486 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 MFAP3LO75121 409 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 PMS1P54277 932 aaKnown RBP16.79■□□□□ 0.28
SCAP-207ENST00000441517 AMPD3Q01432 767 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 RIN2Q8WYP3 895 aaPredicted RBP16.79■□□□□ 0.28
SCAP-207ENST00000441517 PHF20Q9BVI0 1012 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 ABCB6Q9NP58 842 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 ATP8A2Q9NTI2 1148 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 PCDHA4Q9UN74 947 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 PARP3Q9Y6F1 533 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 EFCAB8A8MWE9 144 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 ECM2O94769 699 aaPredicted RBP16.79■□□□□ 0.28
SCAP-207ENST00000441517 STK4Q13043 487 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 TMTC1Q8IUR5 882 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 RNF225M0QZC1 329 aaPredicted RBP16.79■□□□□ 0.28
SCAP-207ENST00000441517 USO1O60763 962 aaKnown RBP16.79■□□□□ 0.28
SCAP-207ENST00000441517 TERF2Q15554 542 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 TCP11X2Q5H9J9 407 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 TRIM31Q9BZY9 425 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 VEZTQ9HBM0 779 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 SAMM50Q9Y512 469 aa16.79■□□□□ 0.28
SCAP-207ENST00000441517 ZEB2O60315 1214 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 GYPCP04921 128 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 OR52Z1P0C646 297 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 KSR1Q8IVT5 923 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 SH2D3AQ9BRG2 576 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 N4BP1O75113 896 aaKnown RBP16.78■□□□□ 0.28
SCAP-207ENST00000441517 ATP2C2O75185 946 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 ERCC5P28715 1186 aaPredicted RBP16.78■□□□□ 0.28
SCAP-207ENST00000441517 SEC23AQ15436 765 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 EHD2Q9NZN4 543 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 XDHP47989 1333 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 GSTO1P78417 241 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 C2orf54Q08AI8 447 aa16.78■□□□□ 0.28
SCAP-207ENST00000441517 CEP112Q8N8E3 955 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms