RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 ADAMTS4O75173 837 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 DEAF1O75398 565 aaPredicted RBP6.09□□□□□ -1.43
PTPN4-206ENST00000441089 NEFMP07197 916 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 ZNF853P0CG23 659 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 GTF2A2P52657 109 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 SUPT20HL1Q3ZLR7 823 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 PRR23CQ6ZRP0 262 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 TBC1D16Q8TBP0 767 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 PAWRQ96IZ0 340 aaKnown RBP6.09□□□□□ -1.43
PTPN4-206ENST00000441089 P2RX7Q99572 595 aaKnown RBP6.09□□□□□ -1.43
PTPN4-206ENST00000441089 LPIN3Q9BQK8 851 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 PPP2R3BQ9Y5P8 575 aa6.09□□□□□ -1.43
PTPN4-206ENST00000441089 COL2A1P02458 1487 aaPredicted RBP6.09□□□□□ -1.44
PTPN4-206ENST00000441089 IL16Q14005 1332 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 TCF20Q9UGU0 1960 aaKnown RBP6.08□□□□□ -1.44
PTPN4-206ENST00000441089 EPG5Q9HCE0 2579 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 WDR87Q6ZQQ6 2873 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 CCL15-CCL14A0A0B4J2E2 113 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 A6NJR5 290 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 ZBTB42B2RXF5 422 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 E9PSI1 815 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 ALX3O95076 343 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 FOSL2P15408 326 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 PSMC4P43686 418 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 CCL15Q16663 113 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 C1orf53Q5VUE5 145 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 TTLL7Q6ZT98 887 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 FBXO11Q86XK2 927 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 GLMNQ92990 594 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 TSR2Q969E8 191 aaKnown RBP6.08□□□□□ -1.44
PTPN4-206ENST00000441089 GSX2Q9BZM3 304 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 ARHGAP39Q9C0H5 1083 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 DEFB129Q9H1M3 183 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 PCMTD2Q9NV79 361 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 PODXL2Q9NZ53 605 aa6.08□□□□□ -1.44
PTPN4-206ENST00000441089 PTPRZ1P23471 2315 aaPredicted RBP6.08□□□□□ -1.44
PTPN4-206ENST00000441089 MYPNQ86TC9 1320 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 ADGRA2Q96PE1 1338 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 FANCIQ9NVI1 1328 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 HTATSF1O43719 755 aaKnown RBP6.07□□□□□ -1.44
PTPN4-206ENST00000441089 UFL1O94874 794 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 HCLS1P14317 486 aaPredicted RBP6.07□□□□□ -1.44
PTPN4-206ENST00000441089 SYN1P17600 705 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 CD97P48960 835 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 CLDN10P78369 228 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 GPSM2P81274 684 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 LMOD3Q0VAK6 560 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 BTLAQ7Z6A9 289 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 TPCN2Q8NHX9 752 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
PTPN4-206ENST00000441089 BRI3BPQ8WY22 251 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 OPTNQ96CV9 577 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 DEFB118Q96PH6 123 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 FZD1Q9UP38 647 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 OAS3Q9Y6K5 1087 aaKnown RBP6.07□□□□□ -1.44
PTPN4-206ENST00000441089 WDFY4Q6ZS81 3184 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 DLG5Q8TDM6 1919 aa6.07□□□□□ -1.44
PTPN4-206ENST00000441089 TRANK1O15050 2925 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 SH3TC1Q8TE82 1336 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 M0R2N6 131 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 CHL1O00533 1208 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 SASH1O94885 1247 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 NFKB1P19838 968 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 FSTP19883 344 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 PSMA6P60900 246 aaKnown RBP6.06□□□□□ -1.44
PTPN4-206ENST00000441089 HSP90AB3PQ58FF7 597 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 PERM1Q5SV97 790 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 CCDC102BQ68D86 513 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 SIX5Q8N196 739 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 FAM43AQ8N2R8 423 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 MYLIPQ8WY64 445 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 IFT57Q9NWB7 429 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 ANKIB1Q9P2G1 1089 aa6.06□□□□□ -1.44
PTPN4-206ENST00000441089 TRMT112Q9UI30 125 aaKnown RBP6.06□□□□□ -1.44
PTPN4-206ENST00000441089 TPRP12270 2363 aaKnown RBP6.06□□□□□ -1.44
PTPN4-206ENST00000441089 CHD9Q3L8U1 2897 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 DDX60LQ5H9U9 1706 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 BAHCC1Q9P281 2608 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 PALM3A6NDB9 673 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 USP2O75604 605 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 RGS9O75916 674 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 CETPP11597 493 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 MYL6BP14649 208 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 CPB1P15086 417 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 RPS8P62241 208 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 EXOSC9Q06265 439 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 KRT24Q2M2I5 525 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 C17orf99Q6UX52 265 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 DZIP1LQ8IYY4 767 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 TSPYL6Q8N831 410 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 RTF1Q92541 710 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 CELF1Q92879 486 aaKnown RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 UHRF1Q96T88 793 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 LBHD1Q9BQE6 289 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 MYH16Q9H6N6 1097 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 ELP3Q9H9T3 547 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 PAK6Q9NQU5 681 aaPredicted RBP6.05□□□□□ -1.44
PTPN4-206ENST00000441089 MIS18AQ9NYP9 233 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 ZFATQ9P243 1243 aa6.05□□□□□ -1.44
PTPN4-206ENST00000441089 LAS1LQ9Y4W2 734 aaKnown RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms