RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 GDF15Q99988 308 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 MKNK2Q9HBH9 465 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 DACH1Q9UI36 760 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.44□□□□□ -0.74
HDAC6-209ENST00000440653 MYH4Q9Y623 1939 aa10.44□□□□□ -0.74
HDAC6-209ENST00000440653 ZSWIM8A7E2V4 1837 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 SMTNL1A8MU46 457 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 BTBD18B2RXH4 712 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 IKBKBO14920 756 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 ECM2O94769 699 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 PLEKHA8P1O95397 391 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 PTPREP23469 700 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 GUCY1A2P33402 732 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 ZNF75DP51815 510 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 NLRP12P59046 1061 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 FKBP1AP62942 108 aaKnown RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 DIXDC1Q155Q3 683 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 PKN1Q16512 942 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 LDLRAD1Q5T700 205 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 C11orf57Q6ZUT1 292 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 ZNF444Q8N0Y2 327 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 TRIML1Q8N9V2 468 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 PIBF1Q8WXW3 757 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 GJB4Q9NTQ9 266 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 TUBE1Q9UJT0 475 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 FBXO2Q9UK22 296 aaPredicted RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 SRPRBQ9Y5M8 271 aaKnown RBP10.43□□□□□ -0.74
HDAC6-209ENST00000440653 SCN9AQ15858 1988 aa10.43□□□□□ -0.74
HDAC6-209ENST00000440653 SIPA1L1O43166 1804 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 TMEM265A0A087WTH1 108 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 C6orf229H3BNL8 230 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 ECE2O60344 883 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 EVI5O60447 810 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 OFD1O75665 1012 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 WDHD1O75717 1129 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-209ENST00000440653 VIL1P09327 827 aaKnown RBP10.42□□□□□ -0.74
HDAC6-209ENST00000440653 USP17L8P0C7I0 530 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 CYP2D6P10635 497 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 SMARCA1P28370 1054 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 INHBEP58166 350 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 ZNF280AP59817 542 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-209ENST00000440653 PLCB2Q00722 1185 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 ORC2Q13416 577 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-209ENST00000440653 LRIT3Q3SXY7 679 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 CT47A1Q5JQC4 288 aaPredicted RBP10.42□□□□□ -0.74
HDAC6-209ENST00000440653 RCSD1Q6JBY9 416 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 SHC4Q6S5L8 630 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 KRBA2Q6ZNG9 492 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 SNX27Q96L92 541 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 FAM161BQ96MY7 647 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 PTPN18Q99952 460 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 SPZ1Q9BXG8 430 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 TRIM5Q9C035 493 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 POLLQ9UGP5 575 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 SWAP70Q9UH65 585 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 KCNH3Q9ULD8 1083 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 KCNJ14Q9UNX9 436 aa10.42□□□□□ -0.74
HDAC6-209ENST00000440653 RASA1P20936 1047 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 MARCKSP29966 332 aaPredicted RBP10.41□□□□□ -0.74
HDAC6-209ENST00000440653 BMP8BP34820 402 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 GSDMDP57764 484 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 RHBDL3P58872 404 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 TFAP4Q01664 338 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 FAM47AQ5JRC9 791 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 STK11IPQ8N1F8 1099 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 CNNM3Q8NE01 707 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 NEDD1Q8NHV4 660 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 TGFBRAP1Q8WUH2 860 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 TNFRSF25Q93038 417 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 ZC3H12CQ9C0D7 883 aaKnown RBP10.41□□□□□ -0.74
HDAC6-209ENST00000440653 ARHGAP39Q9C0H5 1083 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.41□□□□□ -0.74
HDAC6-209ENST00000440653 VPS54Q9P1Q0 977 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 DAGLAQ9Y4D2 1042 aa10.41□□□□□ -0.74
HDAC6-209ENST00000440653 LAD1O00515 517 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 CBFA2T2O43439 604 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 NRDCO43847 1150 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 TPM2P07951 284 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 TOP1P11387 765 aaKnown RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 GJA8P48165 433 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 NOVP48745 357 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 TOB1P50616 345 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 ATP2C1P98194 919 aaPredicted RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 NR5A1Q13285 461 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 NBPF9Q3BBW0 867 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 TTC38Q5R3I4 469 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 ARL6IP4Q66PJ3 421 aaKnown RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 PPP1R18Q6NYC8 613 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 HHIPL2Q6UWX4 724 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 ARMC9Q7Z3E5 817 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 MAPKAPK5Q8IW41 473 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 DHX40Q8IX18 779 aaKnown RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 SRBD1Q8N5C6 995 aaKnown RBP10.4□□□□□ -0.74
HDAC6-209ENST00000440653 AOPEPQ8N6M6 819 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 SLC10A4Q96EP9 437 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 WNK4Q96J92 1243 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 CLMNQ96JQ2 1002 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 EHD4Q9H223 541 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 MYOZ2Q9NPC6 264 aa10.4□□□□□ -0.74
HDAC6-209ENST00000440653 IMPACTQ9P2X3 320 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms