RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 VPS33BQ9H267 617 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 CUEDC2Q9H467 287 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 PSTPIP2Q9H939 334 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 MLXIPQ9HAP2 919 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 HERC5Q9UII4 1024 aaKnown RBP5.08□□□□□ -1.6
SCN3A-204ENST00000440431 TNKSO95271 1327 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 ZMYM6O95789 1325 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 NAV1Q8NEY1 1877 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 XPOTO43592 962 aaKnown RBP5.08□□□□□ -1.6
SCN3A-204ENST00000440431 NR1I2O75469 434 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 PRDM1O75626 825 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 FLOT1O75955 427 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 MYCLP12524 364 aaPredicted RBP5.08□□□□□ -1.6
SCN3A-204ENST00000440431 BMP3P12645 472 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 EZRP15311 586 aaKnown RBP5.08□□□□□ -1.6
SCN3A-204ENST00000440431 SYT1P21579 422 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 SCNN1DP51172 638 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 KRT83P78385 493 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 PDE4DQ08499 809 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 CALCRLQ16602 461 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 ARHGEF16Q5VV41 709 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 KRT40Q6A162 431 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 BLIDQ8IZY5 108 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 SPC24Q8NBT2 197 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 C7orf43Q8WVR3 580 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 KIFAP3Q92845 792 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 DHX58Q96C10 678 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 STRBPQ96SI9 672 aaKnown RBP5.08□□□□□ -1.6
SCN3A-204ENST00000440431 ZKSCAN3Q9BRR0 538 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 WDR11Q9BZH6 1224 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 AP5M1Q9H0R1 490 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 INCENPQ9NQS7 918 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 HOXC10Q9NYD6 342 aa5.08□□□□□ -1.6
SCN3A-204ENST00000440431 WDR19Q8NEZ3 1342 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 FER1L6Q2WGJ9 1857 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PCNTO95613 3336 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 GAS7O60861 476 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 GNA14O95837 355 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 NEFHP12036 1026 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SCG2P13521 617 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 IBSPP21815 317 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 KCNA3P22001 575 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 CTNNA2P26232 953 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 USP8P40818 1118 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 HDLBPQ00341 1268 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SETQ01105 290 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 CTDSPL2Q05D32 466 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PPP2R5AQ15172 486 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SLC15A2Q16348 729 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 KIF18AQ8NI77 898 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 KIFC2Q96AC6 838 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PANK2Q9BZ23 570 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SYNCQ9H7C4 482 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ZNRF3Q9ULT6 936 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PCDHB13Q9Y5F0 798 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PDS5AQ29RF7 1337 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 C21orf2O43822 256 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ALAS1P13196 640 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 P4HA1P13674 534 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 AFMP43652 599 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 UBASH3AP57075 661 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 EN1Q05925 392 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PTPN14Q15678 1187 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 EZH2Q15910 746 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 STRIP1Q5VSL9 837 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 MIER3Q7Z3K6 550 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 DPP9Q86TI2 863 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 NEK11Q8NG66 645 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 DCAF4Q8WV16 495 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 BBXQ8WY36 941 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ATP6V0A1Q93050 837 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ADPGKQ9BRR6 497 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 TEKT3Q9BXF9 490 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 NUCKS1Q9H1E3 243 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 DBNDD1Q9H9R9 158 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SENP2Q9HC62 589 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 LARSQ9P2J5 1176 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 POLLQ9UGP5 575 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ATP6V0A2Q9Y487 856 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 GSG1L2A8MUP6 293 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 RAD17O75943 681 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 TGFB2P61812 414 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 ZYXQ15942 572 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 LRSAM1Q6UWE0 723 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 PIK3AP1Q6ZUJ8 805 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 FASTKD5Q7L8L6 764 aaKnown RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 CHST3Q7LGC8 479 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 NEK8Q86SG6 692 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 TBC1D10CQ8IV04 446 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 GIMAP8Q8ND71 665 aaPredicted RBP5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SNX29Q8TEQ0 813 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 GTF3C6Q969F1 213 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SHISA4Q96DD7 197 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 AK8Q96MA6 479 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 NUP58Q9BVL2 599 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 SELENOOQ9BVL4 669 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 MIS12Q9H081 205 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 HAUS2Q9NVX0 235 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 CCPG1Q9ULG6 757 aa5.07□□□□□ -1.6
SCN3A-204ENST00000440431 HPS5Q9UPZ3 1129 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms