RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 PPATQ06203 517 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 PPIL2Q13356 520 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 USH1GQ495M9 461 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 GADL1Q6ZQY3 521 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 GAS2L3Q86XJ1 694 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 RASGRP4Q8TDF6 673 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 C12orf42Q96LP6 360 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 PPP1R9BQ96SB3 815 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 GDPD2Q9HCC8 539 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 TMOD4Q9NZQ9 345 aa11.51□□□□□ -0.57
CBX5-202ENST00000439541 PASKQ96RG2 1323 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 TRPM7Q96QT4 1865 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 PNMA6FA0A0J9YX94 578 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 NLRP5P59047 1200 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 DNM1Q05193 864 aaKnown RBP11.5□□□□□ -0.57
CBX5-202ENST00000439541 EARS2Q5JPH6 523 aaKnown RBP11.5□□□□□ -0.57
CBX5-202ENST00000439541 C2orf69Q8N8R5 385 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 SLF1Q9BQI6 1058 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 MYH15Q9Y2K3 1946 aa11.5□□□□□ -0.57
CBX5-202ENST00000439541 A0A0G2JLL6 359 aaPredicted RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 C19orf81C9J6K1 198 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 XBP1P17861 261 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 NCLP19338 710 aaKnown RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 HUNKP57058 714 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 FKBP1BP68106 108 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 GNL2Q13823 731 aaKnown RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 SH3D19Q5HYK7 790 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 PRRT2Q7Z6L0 340 aaPredicted RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 FAM160B2Q86V87 743 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 ATG4CQ96DT6 458 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 SLC10A4Q96EP9 437 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 RANBP17Q9H2T7 1088 aaKnown RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 KCNH4Q9UQ05 1017 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 RLFQ13129 1914 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 PEX10O60683 326 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 KRT2P35908 639 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 MOGSQ13724 837 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 RBM46Q8TBY0 533 aaKnown RBP11.49□□□□□ -0.57
CBX5-202ENST00000439541 CHURC1Q8WUH1 139 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 LMBRD1Q9NUN5 540 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 PPP1R9AQ9ULJ8 1098 aa11.49□□□□□ -0.57
CBX5-202ENST00000439541 FIBPO43427 364 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 MBD3O95983 291 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 YY1P25490 414 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 SAFBQ15424 915 aaKnown RBP eCLIP11.48□□□□□ -0.57
CBX5-202ENST00000439541 UBE2SQ16763 222 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 HS1BP3Q53T59 392 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 FBXO11Q86XK2 927 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 NOSTRINQ8IVI9 506 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 SMC1BQ8NDV3 1235 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 CCDC148Q8NFR7 591 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 TNFRSF25Q93038 417 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 PCDHA1Q9Y5I3 950 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 ZNF536O15090 1300 aa11.48□□□□□ -0.57
CBX5-202ENST00000439541 SMCO2A6NFE2 343 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 PLA2G6O60733 806 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 U2AF2P26368 475 aaKnown RBP eCLIP11.47□□□□□ -0.573e-6■■■■□ 23.8
CBX5-202ENST00000439541 CEBPZQ03701 1054 aaKnown RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 CATSPERGQ6ZRH7 1159 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 BLIDQ8IZY5 108 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 CPXCR1Q8N123 301 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 PRPF38AQ8NAV1 312 aaKnown RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 ZNF784Q8NCA9 323 aaPredicted RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 PGBD1Q96JS3 809 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 AGBL1Q96MI9 1066 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 AMNQ9BXJ7 453 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 ZSCAN16Q9H4T2 348 aaPredicted RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 RAVER2Q9HCJ3 691 aaKnown RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 TMEM260Q9NX78 707 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 TFIP11Q9UBB9 837 aaKnown RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 PCDHA4Q9UN74 947 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 A0A0G2JMZ2 1700 aa11.47□□□□□ -0.57
CBX5-202ENST00000439541 COL11A1P12107 1806 aaPredicted RBP11.47□□□□□ -0.57
CBX5-202ENST00000439541 SPDYE16A6NNV3 312 aaPredicted RBP11.46□□□□□ -0.57
CBX5-202ENST00000439541 WNT7AO00755 349 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 CXCL11O14625 94 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 OPLAHO14841 1288 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 PDIA4P13667 645 aaKnown RBP11.46□□□□□ -0.57
CBX5-202ENST00000439541 ADCY7P51828 1080 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 MYSM1Q5VVJ2 828 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 POTEEQ6S8J3 1075 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 PIK3AP1Q6ZUJ8 805 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 BRAPQ7Z569 592 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 ZMYND12Q9H0C1 365 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 FOXP1Q9H334 677 aaPredicted RBP11.46□□□□□ -0.57
CBX5-202ENST00000439541 SLC38A10Q9HBR0 1119 aa11.46□□□□□ -0.57
CBX5-202ENST00000439541 USP17L15C9J2P7 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L13C9JLJ4 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L11C9JVI0 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L18D6R9N7 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L22D6RA61 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L17D6RBQ6 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L19D6RCP7 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 USP17L20D6RJB6 530 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 hCG_1984214I3L0E3 225 aa11.46□□□□□ -0.58
CBX5-202ENST00000439541 M0R2N6 131 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms