RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 SEMA3EO15041 775 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 PARP1P09874 1014 aaKnown RBP15.19■□□□□ 0.02
PCNX3-202ENST00000439247 CXCR5P32302 372 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 GNGT1P63211 74 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 MAP9Q49MG5 647 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 KCNV1Q6PIU1 500 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 MMS22LQ6ZRQ5 1243 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 RREB1Q92766 1687 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 LUC7L2Q9Y383 392 aaKnown RBP15.19■□□□□ 0.02
PCNX3-202ENST00000439247 GOLGB1Q14789 3259 aaKnown RBP15.19■□□□□ 0.02
PCNX3-202ENST00000439247 CICQ96RK0 1608 aaPredicted RBP15.19■□□□□ 0.02
PCNX3-202ENST00000439247 IDEP14735 1019 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 MCM7P33993 719 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 PAPD7Q5XG87 772 aaKnown RBP15.19■□□□□ 0.02
PCNX3-202ENST00000439247 NLRP10Q86W26 655 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 ARL8AQ96BM9 186 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 LRRC1Q9BTT6 524 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 HAUS4Q9H6D7 363 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 YY1AP1Q9H869 796 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 RWDD2AQ9UIY3 292 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 SLC4A4Q9Y6R1 1079 aa15.19■□□□□ 0.02
PCNX3-202ENST00000439247 GRIN2DO15399 1336 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 SHOX2O60902 331 aaPredicted RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 PLEKP08567 350 aaPredicted RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 KRT2P35908 639 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 PDXDC2PQ6P474 469 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 PROM2Q8N271 834 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 SH2D3CQ8N5H7 860 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 SDR42E1Q8WUS8 393 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 LY75O60449 1722 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 CYP2D7A0A087X1C5 515 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 ERICH2A1L162 156 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 B4DLN1 442 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 CPP00450 1065 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 CSF1RP07333 972 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 KCTD19Q17RG1 926 aaPredicted RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 KCTD16Q68DU8 428 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 MB21D1Q8N884 522 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 TSEN2Q8NCE0 465 aaKnown RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 CAPS2Q9BXY5 557 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 IQSEC3Q9UPP2 1182 aaPredicted RBP15.18■□□□□ 0.02
PCNX3-202ENST00000439247 NUP98P52948 1817 aa15.18■□□□□ 0.02
PCNX3-202ENST00000439247 EBAG9O00559 213 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 TUBBP07437 444 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 BRD2P25440 801 aaKnown RBP15.17■□□□□ 0.02
PCNX3-202ENST00000439247 ATP1A2P50993 1020 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 VGLL2Q8N8G2 317 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 KRT23Q9C075 422 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 BRMS1Q9HCU9 246 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 GEMIN8Q9NWZ8 242 aaKnown RBP15.17■□□□□ 0.02
PCNX3-202ENST00000439247 MYH13Q9UKX3 1938 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 HNRNPH1P31943 449 aaKnown RBP15.17■□□□□ 0.02
PCNX3-202ENST00000439247 PDCLQ13371 301 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 RASGRF1Q13972 1273 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 TTC38Q5R3I4 469 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 PHF20Q9BVI0 1012 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 MYH6P13533 1939 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 TNKSO95271 1327 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 CNTNAP4Q9C0A0 1308 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 PP2D1A8MPX8 630 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 PIK3AP1Q6ZUJ8 805 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 NCAPGQ9BPX3 1015 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 UBAC1Q9BSL1 405 aa15.17■□□□□ 0.02
PCNX3-202ENST00000439247 RASSF10A6NK89 507 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 PDE8BO95263 885 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
PCNX3-202ENST00000439247 EVX2Q03828 476 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 NPY5RQ15761 445 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 MLXIPQ9HAP2 919 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 ZNF831Q5JPB2 1677 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 CHD4Q14839 1912 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 ERVV-1B6SEH8 477 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 MNAT1P51948 309 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 TTMPQ5BVD1 217 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 MCTP2Q6DN12 878 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 SPATA5Q8NB90 893 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 ANKRD20A12PQ8NF67 263 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 AENQ8WTP8 325 aaKnown RBP15.16■□□□□ 0.02
PCNX3-202ENST00000439247 DNAJC7Q99615 494 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 CNNM2Q9H8M5 875 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 NHEJ1Q9H9Q4 299 aaPredicted RBP15.16■□□□□ 0.02
PCNX3-202ENST00000439247 CAPN6Q9Y6Q1 641 aa15.16■□□□□ 0.02
PCNX3-202ENST00000439247 MYO1FO00160 1098 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ZNF263O14978 683 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ALX1Q15699 326 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ANKRD18AQ8IVF6 992 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 LRWD1Q9UFC0 647 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ABCC12Q96J65 1359 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 MYH10P35580 1976 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 TAF1LQ8IZX4 1826 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 TARSL2A2RTX5 802 aaKnown RBP15.15■□□□□ 0.02
PCNX3-202ENST00000439247 PCCAP05165 728 aaPredicted RBP15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ERCC3P19447 782 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 TRIM28Q13263 835 aaKnown RBP15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ZNF658Q5TYW1 1059 aaPredicted RBP15.15■□□□□ 0.02
PCNX3-202ENST00000439247 SUSD4Q5VX71 490 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 BICDL1Q6ZP65 573 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ZNF34Q8IZ26 560 aa15.15■□□□□ 0.02
PCNX3-202ENST00000439247 ZBTB38Q8NAP3 1195 aaPredicted RBP15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms