RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 ZNF280CQ8ND82 737 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 GPKOWQ92917 476 aaPredicted RBP eCLIP14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 PCDHA4Q9UN74 947 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 FZD1Q9UP38 647 aa14.22□□□□□ -0.13
HLA-DOB-206ENST00000438763 ATAD5Q96QE3 1844 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 WDR46O15213 610 aaKnown RBP14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 STAT2P52630 851 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 BACE1P56817 501 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 SPP2Q13103 211 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 PRKG1Q13976 671 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 MAP3K11Q16584 847 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 FAM83BQ5T0W9 1011 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 TYW1BQ6NUM6 668 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 BLIDQ8IZY5 108 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 DAGLBQ8NCG7 672 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 OXER1Q8TDS5 423 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 USP28Q96RU2 1077 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 ZMYND12Q9H0C1 365 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 GDPD2Q9HCC8 539 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 FEM1BQ9UK73 627 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 RCOR1Q9UKL0 485 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 ZHX2Q9Y6X8 837 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 ELP1O95163 1332 aa14.21□□□□□ -0.14
HLA-DOB-206ENST00000438763 DOCK1Q14185 1865 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 ESYT2A0FGR8 921 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 C19orf81C9J6K1 198 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 FIBPO43427 364 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 TRAK2O60296 914 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 GNA11P29992 359 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 NAPAP54920 295 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 IKQ13123 557 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 NR5A1Q13285 461 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 ZYXQ15942 572 aaKnown RBP14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 PPP1R18Q6NYC8 613 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 LEO1Q8WVC0 666 aaPredicted RBP14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 TNFRSF25Q93038 417 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 SPATA32Q96LK8 384 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 C6orf50Q9HD87 102 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 RTEL1Q9NZ71 1219 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 PRR12Q9ULL5 1215 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 CSADQ9Y600 493 aa14.2□□□□□ -0.14
HLA-DOB-206ENST00000438763 SMCO2A6NFE2 343 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 TRAF1Q13077 416 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 VGLL4Q14135 290 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 CDC37Q16543 378 aaPredicted RBP14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 QRICH1Q2TAL8 776 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 RILPL1Q5EBL4 403 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 ANKRD13AQ8IZ07 590 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 C12orf42Q96LP6 360 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 EMILIN3Q9NT22 766 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 BAZ2BQ9UIF8 2168 aaKnown RBP14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 AFG3L2Q9Y4W6 797 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 SNCAIPQ9Y6H5 919 aa14.19□□□□□ -0.14
HLA-DOB-206ENST00000438763 M0R2N6 131 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 PPP1R11O60927 126 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 YEATS4O95619 227 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 NASPP49321 788 aaPredicted RBP14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 MTMR2Q13614 643 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 ANO1Q5XXA6 986 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 ARMC9Q7Z3E5 817 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 BICD2Q8TD16 824 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 COA7Q96BR5 231 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 HHIPL1Q96JK4 782 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 AMNQ9BXJ7 453 aa14.18□□□□□ -0.14
HLA-DOB-206ENST00000438763 UNCXA6NJT0 531 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 MBD3O95983 291 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 UBE2HP62256 183 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 NOGQ13253 232 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 TTLL12Q14166 644 aaPredicted RBP14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 SH3D19Q5HYK7 790 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 FBXO11Q86XK2 927 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 PRPF38AQ8NAV1 312 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 LINC00301Q8NCQ3 95 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 GLT8D2Q9H1C3 349 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 RANBP17Q9H2T7 1088 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 NOL7Q9UMY1 257 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 CLIC4Q9Y696 253 aa14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 DDX49Q9Y6V7 483 aaKnown RBP14.17□□□□□ -0.14
HLA-DOB-206ENST00000438763 TCHHQ07283 1943 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 TRIM75PA6NK02 468 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 GADD45BO75293 160 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 VCAM1P19320 739 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 TRAPPC10P48553 1259 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 TOB1P50616 345 aaPredicted RBP14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 MRPL12P52815 198 aaKnown RBP14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 CEBPZQ03701 1054 aaKnown RBP14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 PPATQ06203 517 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 STK38Q15208 465 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 KLHL40Q2TBA0 621 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 KIFC2Q96AC6 838 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 FTOQ9C0B1 505 aaKnown RBP eCLIP14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 RIC8AQ9NPQ8 531 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 TMOD4Q9NZQ9 345 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 PCDHA6Q9UN73 950 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 PCDHA8Q9Y5H6 950 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 PCDHA1Q9Y5I3 950 aa14.16□□□□□ -0.14
HLA-DOB-206ENST00000438763 ADAMTS3O15072 1205 aa14.15□□□□□ -0.14
HLA-DOB-206ENST00000438763 TRPA1O75762 1119 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms