RNA–Protein interactions for RNA: ENST00000438547.6

SEMA4D-211, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4D, Length 4,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-211ENST00000438547 RETREG2Q8NC44 543 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 DDX17Q92841 729 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 DHTKD1Q96HY7 919 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 PGBD1Q96JS3 809 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 MYCBPQ99417 103 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 FAM170AA1A519 330 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 ADD2P35612 726 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 ARL1P40616 181 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 ADAM9Q13443 819 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 RBM26Q5T8P6 1007 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 TPH2Q8IWU9 490 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 SH2B2O14492 632 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 PSMC4P43686 418 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 TBC1D22AQ8WUA7 517 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 AIFM3Q96NN9 605 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 PUS7LQ9H0K6 701 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 CUEDC2Q9H467 287 aa12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 CPSF2Q9P2I0 782 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-211ENST00000438547 TOB2Q14106 344 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 TTC19Q6DKK2 380 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 CCDC62Q6P9F0 684 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 ANAPC4Q9UJX5 808 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 CCNL1Q9UK58 526 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 CYP2J2P51589 502 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 PPP1R21Q6ZMI0 780 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 KIF2CQ99661 725 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 PSTPIP2Q9H939 334 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 DKC1O60832 514 aaKnown RBP eCLIP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 HSPA1LP34931 641 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 STRN3Q13033 797 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 TRPC3Q13507 836 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 TERF2Q15554 542 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 ZNF354CQ86Y25 554 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 VPS52Q8N1B4 723 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 KRT12Q99456 494 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 METTL14Q9HCE5 456 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 CDK12Q9NYV4 1490 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 SAMD9LQ8IVG5 1584 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 MAP3K15Q6ZN16 1313 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 MLH3Q9UHC1 1453 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 TBC1D8O95759 1140 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 CHRNDQ07001 517 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 ZNF658Q5TYW1 1059 aaPredicted RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 PI16Q6UXB8 463 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 ARHGAP24Q8N264 748 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 P2RX5Q93086 422 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 SRPRBQ9Y5M8 271 aaKnown RBP12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
SEMA4D-211ENST00000438547 EPHB4P54760 987 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ANKRD20A3Q5VUR7 823 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 GPHNQ9NQX3 736 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ADAT2Q7Z6V5 191 aaKnown RBP12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ZSWIM5Q9P217 1185 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 KLHL14Q9P2G3 628 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 STK38LQ9Y2H1 464 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 CCDC38Q502W7 563 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 ARHGEF25Q86VW2 580 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 KIFC2Q96AC6 838 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 VPS37BQ9H9H4 285 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 BCORL1Q5H9F3 1711 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 USP6P35125 1406 aa12.29□□□□□ -0.44
SEMA4D-211ENST00000438547 LAD1O00515 517 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 NDC80O14777 642 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 RASSF2P50749 326 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 UHMK1Q8TAS1 419 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 PCDHB6Q9Y5E3 794 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 LIFRP42702 1097 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 TCP10Q12799 353 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 CASP8Q14790 479 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 PRR16Q569H4 304 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 BANK1Q8NDB2 785 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 TTC16Q8NEE8 873 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 TACO1Q9BSH4 297 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 RWDD2AQ9UIY3 292 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 SSX2IPQ9Y2D8 614 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 PRR36Q9H6K5 1346 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 GAS7O60861 476 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 HEXIM1O94992 359 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 NDUFA10O95299 355 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 MFSD14BQ5SR56 506 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 LGSNQ5TDP6 509 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 PLA2G4DQ86XP0 818 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 RASGRP4Q8TDF6 673 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 EPB41L5Q9HCM4 733 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 HSPA2P54652 639 aa12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 RNF10Q8N5U6 811 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 DDX25Q9UHL0 483 aaKnown RBP12.28□□□□□ -0.44
SEMA4D-211ENST00000438547 CDC25AP30304 524 aa12.27□□□□□ -0.44
SEMA4D-211ENST00000438547 ZBED6P86452 979 aa12.27□□□□□ -0.44
SEMA4D-211ENST00000438547 EXOC3L4Q17RC7 722 aa12.27□□□□□ -0.44
SEMA4D-211ENST00000438547 NAA35Q5VZE5 725 aa12.27□□□□□ -0.44
SEMA4D-211ENST00000438547 CCDC170Q8IYT3 715 aa12.27□□□□□ -0.44
SEMA4D-211ENST00000438547 CPXCR1Q8N123 301 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms