RNA–Protein interactions for RNA: ENST00000438204.6

RPE-210, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-210ENST00000438204 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.19□□□□□ -0.62
RPE-210ENST00000438204 SLC25A27O95847 323 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 CYP2C9P11712 490 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 ARID4AP29374 1257 aaPredicted RBP11.19□□□□□ -0.62
RPE-210ENST00000438204 ACVR2BQ13705 512 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 RIOX2Q8IUF8 465 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 NEUROD6Q96NK8 337 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 SUGCTQ9HAC7 445 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 ALG13Q9NP73 1137 aaKnown RBP11.19□□□□□ -0.62
RPE-210ENST00000438204 SNRKQ9NRH2 765 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.19□□□□□ -0.62
RPE-210ENST00000438204 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
RPE-210ENST00000438204 TPRP12270 2363 aaKnown RBP11.19□□□□□ -0.62
RPE-210ENST00000438204 C19orf67A6NJJ6 358 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 MPHOSPH10O00566 681 aaKnown RBP11.18□□□□□ -0.62
RPE-210ENST00000438204 PFKMP08237 780 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 ERMP1Q7Z2K6 904 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 NEK9Q8TD19 979 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 FGD4Q96M96 766 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 EHD4Q9H223 541 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 TRMT13Q9NUP7 481 aaKnown RBP11.18□□□□□ -0.62
RPE-210ENST00000438204 LMCD1Q9NZU5 365 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 VPS13AQ96RL7 3174 aa11.18□□□□□ -0.62
RPE-210ENST00000438204 KMT2BQ9UMN6 2715 aaPredicted RBP11.18□□□□□ -0.62
RPE-210ENST00000438204 NLRC5Q86WI3 1866 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 DMDP11532 3685 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 KIF28PB7ZC32 967 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 ACTN1P12814 892 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 MAMDC4Q6UXC1 1216 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 EP400NLQ6ZTU2 488 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 ASCL5Q7RTU5 278 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 ADHFE1Q8IWW8 467 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 PHOSPHO2Q8TCD6 241 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 ZNF214Q9UL59 606 aaPredicted RBP11.17□□□□□ -0.62
RPE-210ENST00000438204 NCOR2Q9Y618 2525 aa11.17□□□□□ -0.62
RPE-210ENST00000438204 STAT3P40763 770 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 USP5P45974 858 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 PLCD1P51178 756 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 VCPP55072 806 aaKnown RBP11.16□□□□□ -0.62
RPE-210ENST00000438204 DDX10Q13206 875 aaKnown RBP11.16□□□□□ -0.62
RPE-210ENST00000438204 HERC4Q5GLZ8 1057 aaPredicted RBP11.16□□□□□ -0.62
RPE-210ENST00000438204 GORABQ5T7V8 394 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 MSL3Q8N5Y2 521 aaKnown RBP11.16□□□□□ -0.62
RPE-210ENST00000438204 REPS2Q8NFH8 660 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 PPP1R13LQ8WUF5 828 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 PBXIP1Q96AQ6 731 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 BAHCC1Q9P281 2608 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 SCN10AQ9Y5Y9 1956 aa11.16□□□□□ -0.62
RPE-210ENST00000438204 DNAJC25-GNG10A0A024R161 153 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 TMEM221A6NGB7 291 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 M0R296 226 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 UBTFL1P0CB47 393 aaPredicted RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 DEFB103AP81534 67 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 FSCN1Q16658 493 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 PUS10Q3MIT2 529 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 NOL8Q76FK4 1167 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 ARMCX2Q7L311 632 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 TLK2Q86UE8 772 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 RNF135Q8IUD6 432 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 SUGP1Q8IWZ8 645 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 ATOH1Q92858 354 aaPredicted RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 DDX11Q96FC9 970 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 FTOQ9C0B1 505 aaKnown RBP eCLIP11.15□□□□□ -0.62
RPE-210ENST00000438204 KATNBL1Q9H079 304 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 ALDH8A1Q9H2A2 487 aaPredicted RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 ABHD16BQ9H3Z7 469 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 AKAP2Q9Y2D5 859 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 RIPK3Q9Y572 518 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 LCTP09848 1927 aa11.15□□□□□ -0.62
RPE-210ENST00000438204 BAZ2AQ9UIF9 1905 aaKnown RBP11.15□□□□□ -0.62
RPE-210ENST00000438204 TNKSO95271 1327 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 MED19A0JLT2 244 aaPredicted RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 LINC01553A4QN01 128 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 VWA5AO00534 786 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 WDR46O15213 610 aaKnown RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 ID4P47928 161 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 WDR5P61964 334 aaKnown RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 NKX3-2P78367 333 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 CLUL1Q15846 466 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 PRKRIP1Q9H875 184 aaPredicted RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 PIH1D3Q9NQM4 214 aaKnown RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 PRKAG3Q9UGI9 489 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 ADAMTS5Q9UNA0 930 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 DDX49Q9Y6V7 483 aaKnown RBP11.14□□□□□ -0.63
RPE-210ENST00000438204 MICAL3Q7RTP6 2002 aa11.14□□□□□ -0.63
RPE-210ENST00000438204 DMXL1Q9Y485 3027 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 ZFHX4Q86UP3 3567 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 H0Y858 1186 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 CABYRO75952 493 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
RPE-210ENST00000438204 CYP7A1P22680 504 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 KCNJ6P48051 423 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 SLC4A3P48751 1232 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 ERVK-21P61565 698 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 TNFAIP2Q03169 654 aa11.13□□□□□ -0.63
RPE-210ENST00000438204 GABPAQ06546 454 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms