RNA–Protein interactions for RNA: ENST00000438092.6

SHPRH-206, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best) BASIC

Gene SHPRH, Length 6,994 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-206ENST00000438092 SUDS3Q9H7L9 328 aaPredicted RBP11.37□□□□□ -0.59
SHPRH-206ENST00000438092 PTPN22Q9Y2R2 807 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 MEIS1O00470 390 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 PDE6AP16499 860 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 STAT1P42224 750 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ELF2Q15723 593 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 ATL3Q6DD88 541 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 RSPH3Q86UC2 560 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 MYOCDQ8IZQ8 938 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 MLKLQ8NB16 471 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 STK38LQ9Y2H1 464 aa11.37□□□□□ -0.59
SHPRH-206ENST00000438092 POLR2FP61218 127 aaKnown RBP11.36□□□□□ -0.59
SHPRH-206ENST00000438092 MORC3Q14149 939 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 CCDC62Q6P9F0 684 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 CERS3Q8IU89 383 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 C1orf112Q9NSG2 853 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 KDM3AQ9Y4C1 1321 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 UGGT2Q9NYU1 1516 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 ERVV-2B6SEH9 535 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 DENND2CQ68D51 928 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PCIF1Q9H4Z3 704 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 KCNJ18B7U540 433 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 TLR3O15455 904 aaKnown RBP11.36□□□□□ -0.59
SHPRH-206ENST00000438092 CASP2P42575 452 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PABPC4Q13310 644 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHPRH-206ENST00000438092 KCNJ12Q14500 433 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 NUF2Q9BZD4 464 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 AP5M1Q9H0R1 490 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 DPH5Q9H2P9 285 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 AMFRQ9UKV5 643 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 INO80B-WBP1J3KQ70 363 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 CHL1O00533 1208 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PPFIA1Q13136 1202 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 INO80BQ9C086 356 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-206ENST00000438092 MAD1L1Q9Y6D9 718 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 ZNF75DP51815 510 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 SLC12A1Q13621 1099 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 TTC31Q49AM3 519 aaPredicted RBP11.36□□□□□ -0.59
SHPRH-206ENST00000438092 VSIG1Q86XK7 387 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 C7orf31Q8N865 590 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 NT5C3AQ9H0P0 336 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 POLIQ9UNA4 740 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PCDHB4Q9Y5E5 795 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PCDHA1Q9Y5I3 950 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 KDM2BQ8NHM5 1336 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 ADCY8P40145 1251 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 KCTD2Q14681 263 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PI4K2BQ8TCG2 481 aa11.36□□□□□ -0.59
SHPRH-206ENST00000438092 PRAMEF22A3QJZ6 481 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 NDUFAB1O14561 156 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 WDR46O15213 610 aaKnown RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 PDE6CP51160 858 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 MICAL1Q8TDZ2 1067 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 NLRP7Q8WX94 980 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 HESX1Q9UBX0 185 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 KIAA1024Q9UPX6 916 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 PCK1P35558 622 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 KIAA1841Q6NSI8 718 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 PPFIBP2Q8ND30 876 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 NUP153P49790 1475 aaKnown RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 ABCC10Q5T3U5 1492 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 GIGYF1O75420 1035 aaPredicted RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 FGAP02671 866 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 OSBPP22059 807 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 MCF2L2Q86YR7 1114 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 MYLK4Q86YV6 388 aaPredicted RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 ZNF577Q9BSK1 485 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 PFKFB1P16118 471 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 XPAP23025 273 aaPredicted RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 IL1RL1Q01638 556 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 LRCH2Q5VUJ6 765 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 RSRC2Q7L4I2 434 aaKnown RBP11.35□□□□□ -0.59
SHPRH-206ENST00000438092 NEK8Q86SG6 692 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 SYCE1Q8N0S2 351 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 MCUQ8NE86 351 aa11.35□□□□□ -0.59
SHPRH-206ENST00000438092 SERPINB2P05120 415 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 KCNA4P22459 653 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 PPP4R4Q6NUP7 873 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 IL17REQ8NFR9 667 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CNKSR1Q969H4 720 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CLGNO14967 610 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 PROSER3Q2NL68 480 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CFAP221Q4G0U5 840 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 H7C0C1 242 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CLIC2O15247 247 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 OR52Z1P0C646 297 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 ATP5OP48047 213 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 TAOK1Q7L7X3 1001 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CCDC13Q8IYE1 715 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 XPO4Q9C0E2 1151 aaKnown RBP11.34□□□□□ -0.59
SHPRH-206ENST00000438092 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
SHPRH-206ENST00000438092 CLIC4Q9Y696 253 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 HSPD1P10809 573 aaKnown RBP11.34□□□□□ -0.59
SHPRH-206ENST00000438092 ATP5JP18859 108 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 FAM160B1Q5W0V3 765 aa11.34□□□□□ -0.59
SHPRH-206ENST00000438092 FANCBQ8NB91 859 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms