RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 USP17L19D6RCP7 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L20D6RJB6 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 IKBKBO14920 756 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 FCER1AP12319 257 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L24Q0WX57 530 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 SKIDA1Q1XH10 827 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 USP17L6PQ6QN14 398 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 CCDC12Q8WUD4 166 aaPredicted RBP17.54■□□□□ 0.4
SCARF1-203ENST00000434376 WDR24Q96S15 920 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 DACH1Q9UI36 760 aa17.54■□□□□ 0.4
SCARF1-203ENST00000434376 ABL1P00519 1130 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 PRCPP42785 496 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 PMS1P54277 932 aaKnown RBP17.53■□□□□ 0.4
SCARF1-203ENST00000434376 SRRTQ9BXP5 876 aaKnown RBP17.53■□□□□ 0.4
SCARF1-203ENST00000434376 ARGLU1Q9NWB6 273 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-203ENST00000434376 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 CICQ96RK0 1608 aaPredicted RBP17.53■□□□□ 0.4
SCARF1-203ENST00000434376 FILIP1LQ4L180 1135 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 PROM2Q8N271 834 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 PAPPAQ13219 1627 aa17.53■□□□□ 0.4
SCARF1-203ENST00000434376 PLCG1P19174 1290 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 HNRNPH2P55795 449 aaKnown RBP17.52■□□□□ 0.4
SCARF1-203ENST00000434376 UBXN2AP68543 259 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 COL23A1Q86Y22 540 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-203ENST00000434376 SLF1Q9BQI6 1058 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 PDGFDQ9GZP0 370 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-203ENST00000434376 RPN1P04843 607 aaKnown RBP17.52■□□□□ 0.4
SCARF1-203ENST00000434376 CALML3P27482 149 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 ATP2C1P98194 919 aaPredicted RBP17.52■□□□□ 0.4
SCARF1-203ENST00000434376 PDE4DQ08499 809 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 TCP11L1Q9NUJ3 509 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 PPP2R2CQ9Y2T4 447 aa17.52■□□□□ 0.4
SCARF1-203ENST00000434376 ATP2B4P23634 1241 aa17.52■□□□□ 0.39
SCARF1-203ENST00000434376 KCTD19Q17RG1 926 aaPredicted RBP17.52■□□□□ 0.39
SCARF1-203ENST00000434376 DRC1Q96MC2 740 aa17.52■□□□□ 0.39
SCARF1-203ENST00000434376 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.52■□□□□ 0.39
SCARF1-203ENST00000434376 NKRFO15226 690 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 FXR1P51114 621 aaKnown RBP eCLIP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 AEBP2Q6ZN18 517 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 FERMT2Q96AC1 680 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 OSBPL5Q9H0X9 879 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 USP17L10C9JJH3 530 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 RNF225M0QZC1 329 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 KLK7P49862 253 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 CABP7Q86V35 215 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 NOC3LQ8WTT2 800 aaKnown RBP17.51■□□□□ 0.39
SCARF1-203ENST00000434376 TANGO6Q9C0B7 1094 aa17.51■□□□□ 0.39
SCARF1-203ENST00000434376 PNMA6AP0CW24 399 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-203ENST00000434376 RBM26Q5T8P6 1007 aaKnown RBP17.5■□□□□ 0.39
SCARF1-203ENST00000434376 REXO1Q8N1G1 1221 aaKnown RBP17.5■□□□□ 0.39
SCARF1-203ENST00000434376 PAK1Q13153 545 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 KRT31Q15323 416 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 FCHSD1Q86WN1 690 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 DGKHQ86XP1 1220 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 TDRD3Q9H7E2 651 aaKnown RBP17.5■□□□□ 0.39
SCARF1-203ENST00000434376 PKD2L1Q9P0L9 805 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 TRIM10Q9UDY6 481 aa17.5■□□□□ 0.39
SCARF1-203ENST00000434376 STXBP3O00186 592 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 RHBDL3P58872 404 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 MCM6Q14566 821 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 NONOQ15233 471 aaKnown RBP eCLIP17.49■□□□□ 0.39
SCARF1-203ENST00000434376 TC2NQ8N9U0 490 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 MRPL44Q9H9J2 332 aaKnown RBP17.49■□□□□ 0.39
SCARF1-203ENST00000434376 C6orf50Q9HD87 102 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 TCP10L2B9ZVM9 353 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 AKR1B15C9JRZ8 316 aaPredicted RBP17.49■□□□□ 0.39
SCARF1-203ENST00000434376 RAD17O75943 681 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 KRT9P35527 623 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 FKBP15Q5T1M5 1219 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 NELFCDQ8IXH7 590 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 ENOX1Q8TC92 643 aaKnown RBP17.49■□□□□ 0.39
SCARF1-203ENST00000434376 LRRC15Q8TF66 581 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 PSMB7Q99436 277 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 PPP1R3GB7ZBB8 358 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 MTIF2P46199 727 aaKnown RBP17.49■□□□□ 0.39
SCARF1-203ENST00000434376 PDE4CQ08493 712 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 GRM4Q14833 912 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 AOC3Q16853 763 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 ZNF569Q5MCW4 686 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 SPATA1Q5VX52 437 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 GLIS3Q8NEA6 775 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 NUDT12Q9BQG2 462 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 VEZTQ9HBM0 779 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 IMPACTQ9P2X3 320 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 SERPINB13Q9UIV8 391 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 GUCA1BQ9UMX6 200 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
SCARF1-203ENST00000434376 POLRMTO00411 1230 aaKnown RBP17.48■□□□□ 0.39
SCARF1-203ENST00000434376 ARID5AQ03989 594 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 CERS3Q8IU89 383 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 PLEKHA4Q9H4M7 779 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 B4DLN1 442 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 KCNJ18B7U540 433 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 KIF2AO00139 706 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-203ENST00000434376 MRPS25P82663 173 aaKnown RBP17.48■□□□□ 0.39
SCARF1-203ENST00000434376 KCNJ12Q14500 433 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 SBK1Q52WX2 424 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 CCDC148Q8NFR7 591 aa17.48■□□□□ 0.39
SCARF1-203ENST00000434376 TNFRSF25Q93038 417 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms